| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2177 |
|---|
| Symbol | |
|---|
| ID | 7259146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2344352 |
|---|
| End bp | 2345833 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643562067 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002458647 |
|---|
| Protein GI | 219668212 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000457925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATTTTT TTAAGAAAGC ACCTTGTGAA GAAGCATTGT GTGTTATTAA GAGTGTAGAA
GACCGCTTAA ATGGGCTGGA AGTTGAGCTT CCGGATGTGC AGTATCCCAT TCACCAAAAT
CTTGTGAAAA TTTTCGAGAA ACTTTTGGCC AGTGAAGAGC ATATGTCCAA AAGCTCCAAA
AAAATGATTG GCCTTACCTC GGCCTTAAGC AATTTTGACG TGGAGATGAC CCATTCTTCC
CATAAATTGA TTGAATTCGC CAGAGAGATG TCAACCATCA GCGAATCCAA TCTGGCGATT
GTGGAAGAGA TCAGTGCCAG TATGAGTGAA GTGAATGATA CTATCGGCAA TACTTCCGAA
GTGATGAACA GCCTTCAGGA ATCCTCCCGG GCACTTGTCC TCAAAAACGA CGAGAGCATC
GCCCGGATTG AGGAAATCGA TGTGCTGAAG AATGATGTTT CCAAAGATGC GGCCTTGATG
AGCGAACAGA TCAAGGTGCT GGTGGAGATG GCGGTCAAGG TAAATGAGAT TGTGGACGGT
GTGGAGAATA TCGCCAATCA GACCAATCTG CTGGCCTTGA ATGCGGCCAT CGAGGCAGCC
CGGGCCGGAG AAGCGGGAAA AGGCTTTGCT GTGGTTGCGG ATGAAGTGAG AAAGCTGGCG
GACAGCACCA AAACCAGTTT GGGAAACATG CGCTCCTTTG TCAATAACAT CCAACAGGCA
GCGGTAAGCG GGCAGTCCAG CATGGAAAAC ACCATGAACT CCACGGCTAA AATGCACACC
AAATTGGATA TGATATCTCA AACCATCATT GAAAATGTAT CTATGTTAAA GAACACGATC
AGTGATGTTG ATCTGATTAC AGAGTCCTTG GGGCATATCA AGGAATCCGC CAGTCAGATC
AATCAGGCCA TGGAGGCCTC CACTCAGGAT GCCGAAAAAC TCAACCTGAT GACCCAGAGG
ATTCAGGATG ATGCGACCCA AAGCGCCGAC AACGCCAAAG AGATAGCCAG GATCGATGAC
GAACTCAGCG GCCTGGTCAG AGAAATGATC ACCGCCCTGA ACGGCGGCAA AAATGCTGTA
TCCAATCAGG AACTCCTGGA GAATATCAGC AAGGCCAAGG CGGCTCATGC CAACTGGATT
AAAAACCTGA GCAGAATCGT GGAGGAAATG ACAACCTATC CTTTGCAAAC CAACTCGAAG
AAATGCGCCT TTGGTCATTT TTATCACTCC ATGGATGTTT CCGGAACGGT TTTGGAAGAC
GCTTGGCGGG CCATCGATCA GGTCCATGAC GAATTTCATA CCAGCGGCAG TAAGGTCATC
GAGGCTGTCA AAGAAAATAA ACCGGAATTG GCCAGGAACC TGTTTTTACA TACGAAGGAA
CTTTCTCAAA ATATCTTTGC TAAATTGGAT GAAGTCACCC ATATCATAGA AGGCAGCGCC
GCTCAAGGAG TGGAGATCCT GAGAACCAGT AAGGCGAGCT GA
|
|---|
| Protein sequence | MNFFKKAPCE EALCVIKSVE DRLNGLEVEL PDVQYPIHQN LVKIFEKLLA SEEHMSKSSK
KMIGLTSALS NFDVEMTHSS HKLIEFAREM STISESNLAI VEEISASMSE VNDTIGNTSE
VMNSLQESSR ALVLKNDESI ARIEEIDVLK NDVSKDAALM SEQIKVLVEM AVKVNEIVDG
VENIANQTNL LALNAAIEAA RAGEAGKGFA VVADEVRKLA DSTKTSLGNM RSFVNNIQQA
AVSGQSSMEN TMNSTAKMHT KLDMISQTII ENVSMLKNTI SDVDLITESL GHIKESASQI
NQAMEASTQD AEKLNLMTQR IQDDATQSAD NAKEIARIDD ELSGLVREMI TALNGGKNAV
SNQELLENIS KAKAAHANWI KNLSRIVEEM TTYPLQTNSK KCAFGHFYHS MDVSGTVLED
AWRAIDQVHD EFHTSGSKVI EAVKENKPEL ARNLFLHTKE LSQNIFAKLD EVTHIIEGSA
AQGVEILRTS KAS
|
|---|
| |