Gene Dhaf_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2062 
Symbol 
ID7259031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2224808 
End bp2225929 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content53% 
IMG OID643561955 
ProductLVIVD repeat protein 
Protein accessionYP_002458535 
Protein GI219668100 
COG category[S] Function unknown 
COG ID[COG5276] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTTA AACTGATAGG ACAAAACAGC CTTCAGGGGC ATGGCAAAAC CATGCAGGTT 
ATGAAATACA AAGACTATTT GTACGTGGGA AACATGGTTC CAGGGATCGG TACCATCATT
GTCGATGTTA CCAATCCTTC TCTTCCCCTG GTGTGCGGGG AAATGCCGGC TTACAAAAAC
GCTCTTTGCT CAAAAGTCCA AATTGTGGAT GACCTGATGA TTATCAACTA TGAATGCCGT
ACGGGGAAAC CTGCCGAAAG GCTCGGATTT TCAATCTATA GTCTGCAGGA CCCGAAAAAC
CCGCGGGAGA TTGCCTATTA CCATGTGGGC GGACAAGGGG TTCACCGCAC CTGGTATAGC
GGGGAGGAGC CTTATATCTT TGTCACGGCG GTGCCGGAAG GGTTCAGTGA CCGGATGCTG
CTGATTGTGG ATATCAAGGA TCCGGCCCAT CCCCAAGAGG TCGGGCGTTG GTGGTATCCG
GGCCTGTGGA CGGCAGGGGG AGAAAAGCCG GATCAACCCC AGGGACTGAA GTACAAGCTC
CATCATGCCA TGGTGCACAA GGACCGGGCT TATTTGGGGA TGTGGGATGC CGGAATGTAT
ATTTTGGATA TATCCCAAAT CTCAAATCCG CAAGTGGCGG GCAGCATCAA TTGGGGTCCG
GAAAGGGGAG GGCATACCCA CACAGGGCTT CCGCTTCCCC GGCGCAATCT GCTTGTGGTA
ACGGATGAGG CGAAAGGACT GCCCGGGGAA GAATCTCTGA AGGCTGTCAG AATCCTGGAC
ATCAAAGATG ATAAGAACCC CAGGGTGCTG TCCGAGTTCT ATGTGGAGAA TGAAGATTAT
GGGAGATACG GGCCCCGGTT CGGACCGCAT AATCTTCATG AAAACCGCCC CGGTTCCTGG
CAAAGCGATG AAATAATTTT TGTTACCTGG TTTGGCGGCG GGTTAAGAGT TGTCGATATC
AGCGACCCCT GCCGGCCTAA GGAGATGGAT CGGCTCATAC CGCCGCCGGT TGCCGGTATG
CCTCCCACTC AGGTCAATGA TGTCTTTGTC GGTCAAAACG GTTTGCTTTA TTTAACAGAC
AGGGCCGGCA GCGGCATCAT GATTGCCGAG TTTACCGGTT AA
 
Protein sequence
MALKLIGQNS LQGHGKTMQV MKYKDYLYVG NMVPGIGTII VDVTNPSLPL VCGEMPAYKN 
ALCSKVQIVD DLMIINYECR TGKPAERLGF SIYSLQDPKN PREIAYYHVG GQGVHRTWYS
GEEPYIFVTA VPEGFSDRML LIVDIKDPAH PQEVGRWWYP GLWTAGGEKP DQPQGLKYKL
HHAMVHKDRA YLGMWDAGMY ILDISQISNP QVAGSINWGP ERGGHTHTGL PLPRRNLLVV
TDEAKGLPGE ESLKAVRILD IKDDKNPRVL SEFYVENEDY GRYGPRFGPH NLHENRPGSW
QSDEIIFVTW FGGGLRVVDI SDPCRPKEMD RLIPPPVAGM PPTQVNDVFV GQNGLLYLTD
RAGSGIMIAE FTG