Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1952 |
Symbol | |
ID | 7258921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 2100468 |
End bp | 2101712 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643561848 |
Product | transposase IS4 family protein |
Protein accession | YP_002458428 |
Protein GI | 219667993 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 66 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGACA AGGATACTAC GCAATCCACA TTTATGCAAG CCTTTCAGCC GTTTTTTTCG AAAGATCTAT GGGAAACTAT TCACCGGGAG GTCCCTGGCC TTGACCTTCG GTCTCAAAAA CTAACAACCA ATCAACTCAC TCTCCTCATT AGCCATGCTC AACTTCAAGA ATACAGAGCT TTGCGAAAGA TCAGTACAAG TGTTCACCAT GACAGTTTAG GTCAAGCTAT CGGACTCGAA AGCATTAGTC ACAGCCAGAT TTCCCGAAGG TTAAAGACCT TACCCACTCA AGTTCCGGAA ATGCTTTTTA AGGGCACTTT ACATAACGTA GCTCAAAAGC AAGGGTATGG GAAGATTCGG CAGCAACTCG GAAAATTGTA CATGATTGAT GCATCCACCA TGAGCCTATG CCTTTCCCGC TACCCCTGGG CAGTCTTTAG AAAGAGCAAA GCCGGTGTCA AAATGCATCT GCGTTTAAGC TTTGATGCAA TGGCTGTCCC GGATGAAGTG CTCGTTACCC CGGCCAAGAC CGCCGACCGC AAGAAACTGG ATGAGCTCAT TGTTCAAGAC CAAGAGGCTT TGAATATCTT TGATCGGGGT TATGTGGATT ATAAGCTCTT TGATGATTAC TGTGAAAAGG GAATACGCTT TGTGACTCGT CTCAAAAACA ACGCGGTGAT AGAGTTTACT GGAGTAGAAC GTCCAGTCAA AGAAGATGGG CTCATCGAAG AGGACGTGGA TGTCATCTTA GGAGCAGGTT CTCGAAAAAT GAAGCATACC CTTCGGGAAG TGACGATAGA TGATAACGTC CATGAACCCT TCACCATCCT GACGAATGAT TTTAACCTAA GTGCCGAAGA ACTCGGTGAG ATCTATCGCT ATCGCTGGCA GATTGAGTTA TTTTTTAAAT GGCTCAAGCA GCATGCTCAA ATTAAACACT TTTACGGCAC GAGTGAGACC GCAGTCATCA ACCAAATCCT CCTAGCCCTG ATGATGTATT GCTTATTAGT TCTGCTCAAG CTTGAGGCGG GCTATCCAAG AGATTTACTC ACTTTGCAGC GACTGCTGAT CGCCTGTCTG TTTGAGAGGT ATGAAGAGTT TTTGGAGAAG CTGCGACGAC GAAGGAGAAA GGGCTCCAAA CGAATCCGTT ATGAGGAGAT CTATAGAATG ACGGAGCATT CTATCTTGAA AGAAGAAGAG ACCCAATGGC TCGATGATTT AACCTATGAC CCAGTGATAC TGTAA
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Protein sequence | MQDKDTTQST FMQAFQPFFS KDLWETIHRE VPGLDLRSQK LTTNQLTLLI SHAQLQEYRA LRKISTSVHH DSLGQAIGLE SISHSQISRR LKTLPTQVPE MLFKGTLHNV AQKQGYGKIR QQLGKLYMID ASTMSLCLSR YPWAVFRKSK AGVKMHLRLS FDAMAVPDEV LVTPAKTADR KKLDELIVQD QEALNIFDRG YVDYKLFDDY CEKGIRFVTR LKNNAVIEFT GVERPVKEDG LIEEDVDVIL GAGSRKMKHT LREVTIDDNV HEPFTILTND FNLSAEELGE IYRYRWQIEL FFKWLKQHAQ IKHFYGTSET AVINQILLAL MMYCLLVLLK LEAGYPRDLL TLQRLLIACL FERYEEFLEK LRRRRRKGSK RIRYEEIYRM TEHSILKEEE TQWLDDLTYD PVIL
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