| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1900 |
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| Symbol | |
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| ID | 7258869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2036128 |
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| End bp | 2038281 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643561797 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002458377 |
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| Protein GI | 219667942 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCCG TTAAAAAAAA ATTAAAACGA ACCCCAAATC AGACTTGGAA TAAACCGGTA
ATGACTAAAG AACGCTGGGA AGGCATTCTT GCTTTTAAGG CGCAATTTGT CGCCGATAGC
GGCGCCGATC CGCTTGCCTG TCCGCATCTG GACAAGATGG TGGCGGAATC ATGGATAAGA
TCCCGCCTAG CTGGGGTTGA TCCTTATAAA AATGCCGTTA ATCATTATCT GCATCGTGAA
CAGTACGAAA AAATAGTGAA GAAGAGCGCA TTTCTCATTG AGGTGACCAA ACCACTTTTC
GACGTGTTCA AAAATCTTAT TCACTCCTCC AATTATGAAA TGCATTTAAT CGATACCGCA
GGCAACAGTC TCCTAAATGA AAACAGCTAT AGGTATCTCA TGAATCCTCT TGAGAAGAGA
GACTTGCATT TCACCTTATC CAGCAGTGAA AGCACTACCG GAACATGCGC CCATGCGCTT
GCCTTACGGC ACAAAAAACC GGTGCAGCTG TTCGGCCCGG AACACTACCT TTGGGAACTG
CAGGACATTG TAGCTTCATC GGCTCCGGTT TTTAACGAGA ACAACGAAGT CATCGCCGCC
TTGTCTCTGA TCCAGCATTT AAATGACTCC CCCTGGGCGG AAGGGTATCA AGTTCTCTGT
ACCCATACCC TCGCTCTGAT TACAGCCATA ACCAAGGCTA TTGAAGCCCA GCTCAAGCTC
CATAAGAGTT ATGAAAAATT AGCGGATAAT AATCAGCAAT TACTTCTGGC CAATAGCGAG
CTCTCTGCTG CGAATCAGCA AATTCTCACC ACCCATGATC TGCTGCGGAC TACTTTGTCT
TTGACCGGCG AGGCAATCAT CACAATTGAC TGCCAGGGCA ATATTTTAGA AATGAACGAA
ACCGCCCGGA AAATACTGCA GATACCACCC GATTCTCAAG AAAATGTGAA TATTACCGGC
TATTTGTCCA AGAATTGTTT ACTGTTAGAC TGGGTTGCTG AAGGCAAAGA TCTTACCGAT
AAGGAAGAAA TATTCTATTT CGGCAATACG CCCCAATCCT ATATTGTCAG CATGAAAGTG
GTTCTGGGTG ACAATAAAAA TGGGGGACTG GCGGTACTGA GGTTTCAGAA TGCCAGAACG
TATAATCTGA ACGCTACGAA AAGAGCCGGA ACCAATGCCA GTTTCCATTT TGATGACCTG
ATCGGGGAGA GCCCCTCGTT TAAAGGGACT TTATCCTTAG CTAAAAAATT CTCCAAAACC
TCTGCAAATA TTTTGTTGTT GGGAGAAAGC GGCACCGGCA AAGAGCTGCT TGCGCAATCC
ATTCACAACG ACTACCGGCC GGAGGGACCT TTTATCGCCT TGAATTGCGC CGCTATCCCT
AGGTCGTTAA TCGAAAGCGA ATTATTCGGC TATGAGAGCG GTTCGTTTAC CGGTGCCGAT
CGCACCGGCC GCCCCGGTAA AATTGAGTTG GCCGACAAGG GTACTTTGTT TCTGGACGAA
ATAGGCGACA TGCCCCTGGA TATTCAGGCG GTACTGCTGC GTGTTTTGGA AGACAGGAAG
GTCTTACGGA TTGGTGGACG AAAAGCAAAA AATGTGGATT TCCGCGTCAT TGCTGCAACC
AATAAAGATC TCCGGCGCAT GGTGCAGGAG AAAACGTTTC GCGAAGATAT TTATTTTCGC
TTATCGGTTC TGACCATCCA CATTCCGCCG CTTAGGACAA GAAGCGGCGA TATCGAAAAA
TTATGCCAGT ATTTCTTGTC GAATTACTGT AGAAGCAACG GATACGGAAA AAAAGCTCTG
TCCGAAGAGG CCCTGTATCT GTTGACCTCA TACAGCTGGC CGGGCAATAT CCGCCAACTG
GAGAATGCGA TTATTTATGG TATCAATCTA TCGGATAACT CTCTCATTGA AGCCAGGCAT
TTGCCGACAG ATATCTTGGG AGCCGATAAA GTCGAAAAGC CCAAACGGCC TCCGGCTATG
GAAATACCTG CAACCCATGA AGCTTATGGT CGTTCATCCA CATTACAGGA AATGGAATTA
AATGCCATTA TTATGGCTTT AGAAAAAACG AATAATAGTG TAACGAAGGC GGCAAAAATC
CTGAACATCA GCAAGTCAAC CTTATATCGC CGTTTAAGAG AACTTAATAT GTGA
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| Protein sequence | MIPVKKKLKR TPNQTWNKPV MTKERWEGIL AFKAQFVADS GADPLACPHL DKMVAESWIR
SRLAGVDPYK NAVNHYLHRE QYEKIVKKSA FLIEVTKPLF DVFKNLIHSS NYEMHLIDTA
GNSLLNENSY RYLMNPLEKR DLHFTLSSSE STTGTCAHAL ALRHKKPVQL FGPEHYLWEL
QDIVASSAPV FNENNEVIAA LSLIQHLNDS PWAEGYQVLC THTLALITAI TKAIEAQLKL
HKSYEKLADN NQQLLLANSE LSAANQQILT THDLLRTTLS LTGEAIITID CQGNILEMNE
TARKILQIPP DSQENVNITG YLSKNCLLLD WVAEGKDLTD KEEIFYFGNT PQSYIVSMKV
VLGDNKNGGL AVLRFQNART YNLNATKRAG TNASFHFDDL IGESPSFKGT LSLAKKFSKT
SANILLLGES GTGKELLAQS IHNDYRPEGP FIALNCAAIP RSLIESELFG YESGSFTGAD
RTGRPGKIEL ADKGTLFLDE IGDMPLDIQA VLLRVLEDRK VLRIGGRKAK NVDFRVIAAT
NKDLRRMVQE KTFREDIYFR LSVLTIHIPP LRTRSGDIEK LCQYFLSNYC RSNGYGKKAL
SEEALYLLTS YSWPGNIRQL ENAIIYGINL SDNSLIEARH LPTDILGADK VEKPKRPPAM
EIPATHEAYG RSSTLQEMEL NAIIMALEKT NNSVTKAAKI LNISKSTLYR RLRELNM
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