| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1877 |
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| Symbol | |
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| ID | 7258846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2007823 |
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| End bp | 2009907 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643561774 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002458354 |
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| Protein GI | 219667919 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAATA ACCGAGGTTC GGACTCCCTG ACAAATAAAC AGCGTTCAGC ATTGATTACC
CAGGAACGGA TTGACAATAT ATTAAGGTGG AAGGAGAAAT TTCTAAACGA ACCCCATAGC
GTAGATCCTC GTGAATGTGA TGACATTAGC AATGAGGTGG CGGAATCCTG GCTAAGGTCA
AGAGACAGGG GAATCGATCC CTATAACTCC ATGAGCAAGC CCTATCCCAA CTCGAGAGAG
CACGCTGAAA AAATTGTAAA AAACCGTCCG TTAATCGAAA TCACCAAACC TCTGATGGAG
AAATTCAGAG ATATGGCAGT GCTGCCAAGT GGCTTCATTT TATACTTATG CGATTATACG
GGAGCATTTT TACTTCAAGC CGGGGATATG GTGAGAGTCC CCACTGAAGG GGTGGCCTGG
AATGAAAGCA CCATCGGCAC CTGTGCTCAT ACCATATGTA TGGAGTTGAA AAAACCGATC
CAAATATTGG GCCCGGAACA CTACTGCGTG GGACTGCATA ATATTGTCGG TTCAGCGGCA
CCGATTATGG ATGAATCGGG AAAAGTTATT GCTTCAATCA TCCTGGGTCA ACCGATTGAG
TATCGATTGG AAGGAGAGTA TTTCAATAAT TTTCTCTCCC ACACCCTGGG ACTGATTACT
GCCTTGGCTA AAGCGATTGA GACTCAGCTG AAGCTTAATC AAACCAATGA ATTGCTGACA
GAGAGCAACA GTAATCTGAT TAAGGTAATT CACGAGTTAA ACACCACGAT GGACACCCTG
GAGACGACAC TGGAAGTCAT GGACGAAGGG ATTATCACCC TTGATCCCTC AGGAAGGATC
ATTAACATGA ATCGGGAGGT AACCCGGATT TTTAAAATAA GGCCCGAGGA AAAATCTCAT
AAAAACATCA ATGAATTTTT GCATACACAC TCTCAGGTTG CAGCCCTGAT CACGGCCGGA
AAAAGTGTGG ACATTGAAGA AAATCTCGTC ATCGGCAATG ATGAGCAACC CTATATAATT
AATATCCGGC CGGTGCTGAA CAAAAAGACC CAGCAGATCG AAGCCGCTGT CTTACGGCTC
AATCATGTGG ATAAAGTCAA TGCTCAAGCG GCCAATCGTA CGGGTTCCAT TGCCACCTAT
AGCTTTGAAT GCATCGTCGG TGAATCTGAA GAAATAAAGA AAGCCGTCTC CATTGCCAGA
CGTTTTGCAA CCTCATCGGA AAATGTCCTG CTCATGGGTG AAAGCGGGAC AGGCAAGGAA
CTTTTTGCCC AAGCGATCCA TAATCATTCC TGCCCGCTGG GACCTTTTAT GGCGGTCAAC
TGTGCGGCCA TGCCCCGGGA ATTGATTGAG AGCGAGCTTT TTGGCTATGA AGGGGGAAGC
TTTACCGGGG CTGAACGGAC TGGCAGACCG GGGAAAATCG AGTTGGCCCA TGGCGGCACA
CTTTTTCTCG ATGAAATTGG GGACATGCCC CTTGAGCTCC AGGCCGTTTT GCTGAGAGCT
TTGGAAGATA AGCAAATCAT GCGGATCGGC GGCCGGCGCT ACAAAAAAGT AGACTTCAGA
CTGATTGCCG CCACCAATAA AAATTTATTC AAAATGGTCA AGGAAAGACA ATATCGGGAA
GATTTGTATT TCCGGCTTTC TGTATTGACC ATCACTATTC CTTCCTTAAG AAACAGAAAA
AATGATATTG ATGTGCTGAG TCAATATTTC ATCAAAAACT ACTGTCAAAA GCAGGGGTGG
AAGACCCCTA AGATCACGAA AGGAGCCCTC AGGAAGATTC AGGAATACGA ATGGCCGGGC
AACGTAAGAC AGCTGCAAAA TGCGCTGATT TATGCCGTCA ACTCGGCCCA CAATGATGTT
ATCGATACCG ATAGCCTCCC TCAATATATC CTGCTGGACT CCAGTCCATT TCAGGATGAG
CCTAATTTCA CAACTGATTC CCTATCTTTG GAACATTTGG AAAAAAATGC TATAAAAACT
GCGCTGCTTC ATGCTAAAAA TTCCATACCG GATGCCGCTA AATTATTGGG GATCAGCCGC
TCAACCTTAT ATCGGAAATT AAAAGATTAT GGCTTTGAGT ACTGA
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| Protein sequence | MVNNRGSDSL TNKQRSALIT QERIDNILRW KEKFLNEPHS VDPRECDDIS NEVAESWLRS
RDRGIDPYNS MSKPYPNSRE HAEKIVKNRP LIEITKPLME KFRDMAVLPS GFILYLCDYT
GAFLLQAGDM VRVPTEGVAW NESTIGTCAH TICMELKKPI QILGPEHYCV GLHNIVGSAA
PIMDESGKVI ASIILGQPIE YRLEGEYFNN FLSHTLGLIT ALAKAIETQL KLNQTNELLT
ESNSNLIKVI HELNTTMDTL ETTLEVMDEG IITLDPSGRI INMNREVTRI FKIRPEEKSH
KNINEFLHTH SQVAALITAG KSVDIEENLV IGNDEQPYII NIRPVLNKKT QQIEAAVLRL
NHVDKVNAQA ANRTGSIATY SFECIVGESE EIKKAVSIAR RFATSSENVL LMGESGTGKE
LFAQAIHNHS CPLGPFMAVN CAAMPRELIE SELFGYEGGS FTGAERTGRP GKIELAHGGT
LFLDEIGDMP LELQAVLLRA LEDKQIMRIG GRRYKKVDFR LIAATNKNLF KMVKERQYRE
DLYFRLSVLT ITIPSLRNRK NDIDVLSQYF IKNYCQKQGW KTPKITKGAL RKIQEYEWPG
NVRQLQNALI YAVNSAHNDV IDTDSLPQYI LLDSSPFQDE PNFTTDSLSL EHLEKNAIKT
ALLHAKNSIP DAAKLLGISR STLYRKLKDY GFEY
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