Gene Dhaf_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1812 
Symbol 
ID7258781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1938896 
End bp1939948 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content57% 
IMG OID643561712 
Producttransport system permease protein 
Protein accessionYP_002458292 
Protein GI219667857 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.685396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATA CCAAAGAGTC AGCGCAACTG CTTAAGGCAG GGCAGGACAA GAAAAAAGGC 
CGTACCTGGG CGGGGAGCCT CATTATTCTG GGCGGAACGG GACTGCTTAT ACTGCTGATG
GCCTTTTCCA TCACCAAGGG AGCGGCGGAA ATCCCCCTCT CCGTGATCGG GGATGTCTTG
TTCCGCTTTG ACTCTATGAA TACTCAGCAT TTAATTATCG TGGATCTCCG TCTGCCCCGG
GTCATCGCCA GTGCCATGGT CGGGGCGGCC TTTGCTGTGG CCGGAGCCAT TATGCAGGGG
ATAACCCGCA ATCCTTTGGC GGACTCCGGG CTGCTGGGGC TCAATGCCGG GGCCGGCTTT
GCCCTGTCTC TTTGCTTTGC TTTTTTTCCC GGTATGGGGT ATATGCAGGT TATCTTTTTT
TCCTTTTTAG GCGCGGCTCT GGGGGCGGCT TTGGTCAACG GTATCGCCTC TATGAGGCGG
GGAGGAGCCA CTCCCATGCG GCTGGTGCTG GCCGGTGCCG CGGTCAGCGC TCTTTTGATC
GCCCTCAGTC AGGGCATTGC TCTGTATTTT GACGTAGCTC AGGATATTAT GTTTTGGACG
GTGGGAGGGG TGGCCGGTTC CAACTGGGTT CAGATTAAGA TCATGACACC ATGGATCCTG
GGCGCCCTGC TGGGGGCCAT GATCCTTTCC CGTTCCATCT CCCTGCTCAG CCTTGGTGAA
GAGGTGGCCA AAGGATTGGG CTTGAACACC CTGACCATCA GTATGCTCTG TTCTCTGATC
GTGGTCATCC TGGCCGGGGC TTCCGTTGCT GTGGTGGGTG CCGTGGGCTT TGTGGGACTG
ATCATTCCCC ATATTGTCCG TTATTTGGTA GGTGTGGATT ATCGCTGGAT CATTCCTTCT
TCGGCGGTCA TGGGGGCTTT GCTCATGGTG CTGGCGGATC TGGGGGCCAG GAGGCTTAAT
CCCCCCTTTG AGACACCCGT CGGCGCTCTG ATCGCTGTGG TCGGCGTTCC TTTCTTTCTC
TATCTCGCAC GCAGGCAAAA GAGGGCATTG TAA
 
Protein sequence
MKHTKESAQL LKAGQDKKKG RTWAGSLIIL GGTGLLILLM AFSITKGAAE IPLSVIGDVL 
FRFDSMNTQH LIIVDLRLPR VIASAMVGAA FAVAGAIMQG ITRNPLADSG LLGLNAGAGF
ALSLCFAFFP GMGYMQVIFF SFLGAALGAA LVNGIASMRR GGATPMRLVL AGAAVSALLI
ALSQGIALYF DVAQDIMFWT VGGVAGSNWV QIKIMTPWIL GALLGAMILS RSISLLSLGE
EVAKGLGLNT LTISMLCSLI VVILAGASVA VVGAVGFVGL IIPHIVRYLV GVDYRWIIPS
SAVMGALLMV LADLGARRLN PPFETPVGAL IAVVGVPFFL YLARRQKRAL