| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1727 |
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| Symbol | |
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| ID | 7258696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1853872 |
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| End bp | 1855320 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643561629 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002458209 |
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| Protein GI | 219667774 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 65 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCA GGCTCAAGGA GATCATAGCT CAATACCCAT TTTTCTTCGA TATACTCAAT
ACGATTGATG CCTCAGTCTA TTTGTGTGAT AATAATGGCC GGTTGCTCTA TGTCAACAAA
GCTGCCGAGC GGCTGGATGG TTATACCAAC GAAGAGCTTT ACGGACGTAC TGTTACTGAG
ATTTATGGTT TGGATGAGGA AACAAGCCCG ATGCTCAGGG CCTTAACTTC CGAAAAGCCT
TTGGAGGATA TAAGTTTCCG CTATGATGTT AATGGCCGTG AGATTTATCA AATCTGCAAT
GCCCGTCCCA TTTTTTTAGA CGGGAAAAAG TTTGGCGCCT ATACCATCCA AAAAGATGTG
ACCCATCTTA TGGAGGTTAT CGAGCGGAAT ATCCGCTTTC AGAAAGAGAT GTTTTCACCC
ATAAGTGATT CTGAAGGGTT TGGCATCGAC AGTCTGATCG GCGAGCATCC TCTCTTTAAG
GAATGCAAGA AAATGGCCAT CAGGGCTGCC AAAAGCGATT CTCCCGTGCT GCTGACCGGA
GCAACGGGCA GCGGGAAAGA GCTCTTTGCC CGCTGTATTC ATCAGAACAG CGACAGGAGC
AAAGGGCCCT TCCTGGCCAT TAACTGTGCC GCTATTCCCG AAACCCTTCT GGAAAGCATC
CTTTTCGGCA CCTCGAAAGG AATCTATACC GGGGCCTTGG AGCGGAAAGG CCTTTTCGAG
CAAGCTGAAG GGGGTACCTT GTTTTTGGAT GAAATCAATT CCATGCCCCT GGTGTCACAG
TCAAAGCTGC TGCGCGTCCT GGAAGAAAAG GAGATCGCTC ATCTGGGGAG CAATGAACGC
ATTAAAGTCG ATGTGCGTAT TATCAGCAGC AGCAACACTC CCCCTCAGGA GGCGATCAGC
AGCAAACAGA TCCGGGAGGA TATTTTCTAC CGCCTGGCTG TGGTCAATAT TATGATCCCC
AGCTTGGCTG AGCGCAAAAG TGATATTTTC CTGCTGGCCA ATCATTTTAT TTCCGTGTTT
AACGAGCGCT TCCAAAAACA TATCCTGGCC CTTGATGATG AAGTATTGGG TTTTTTTCTG
AAATTCCCCT GGCCGGGCAA TGTCAGGCAG CTGAAGCATT GCATCGAATC GGCCATGAAC
TTCGTTACCG ATGAGGATCT TAGAATCAGT AAGGACCACC TGCCGGTGTA TCTGTTTTCA
ATCGATAATG CAGCGAACCA TGGAGCCCAG GGCAGCAGCT TCCCCAAAGA GCCTGTGGAT
AGAAACAGGG AGAGTAAACC TCCGGAACCG GAAAGCACCG GTGTATTTTC AGCCATTGTT
CAGAAAGAAA AAGAGCAGAT CATTAAAGCT TTAATGGAGA ATCAAGGGAA TGTTTCCAAA
ACGGCCAAGC AGTTGGGGAT GCATCGTCAG TCCCTGATCT ACAGGATTAA AAAATATAAA
ATTACATAA
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| Protein sequence | MKTRLKEIIA QYPFFFDILN TIDASVYLCD NNGRLLYVNK AAERLDGYTN EELYGRTVTE
IYGLDEETSP MLRALTSEKP LEDISFRYDV NGREIYQICN ARPIFLDGKK FGAYTIQKDV
THLMEVIERN IRFQKEMFSP ISDSEGFGID SLIGEHPLFK ECKKMAIRAA KSDSPVLLTG
ATGSGKELFA RCIHQNSDRS KGPFLAINCA AIPETLLESI LFGTSKGIYT GALERKGLFE
QAEGGTLFLD EINSMPLVSQ SKLLRVLEEK EIAHLGSNER IKVDVRIISS SNTPPQEAIS
SKQIREDIFY RLAVVNIMIP SLAERKSDIF LLANHFISVF NERFQKHILA LDDEVLGFFL
KFPWPGNVRQ LKHCIESAMN FVTDEDLRIS KDHLPVYLFS IDNAANHGAQ GSSFPKEPVD
RNRESKPPEP ESTGVFSAIV QKEKEQIIKA LMENQGNVSK TAKQLGMHRQ SLIYRIKKYK
IT
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