Gene Dhaf_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1717 
Symbol 
ID7258686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1840228 
End bp1841349 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content43% 
IMG OID643561619 
ProductYibE/F family protein 
Protein accessionYP_002458199 
Protein GI219667764 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000872311 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAAA ATCTTTATAA ATACATCGTT TTGGGGATCA TTTATATAGC GTTTTCCTTT 
ATATCTTCAA GCCATATCTG CCTGGCTGCC GCCGAGATAT CATCATCCCC TTCAGAGAAA
CAAGAAAAAA TGGTCCGAGC AAGAATTATC AGCATTGATC TGCAAAAGCA TCAAAACTCC
GCTCAGTCTG TCGAGTTAAT TACCTTAGAG GGGGCGCATA AGCAGCAAAG ATTTGTTACG
AGTTTTTATG CTACCGGTAT TTTTTACGGA ATTACTCTTA GAGAAAACGA CGAGGTGTTC
GTTACCCTTT TTCTTAACGG GGATGGGGCT GTGGAGAAAG TGAGTATTAC AGAGATTGCC
CGCGATAAGT ATATGACCTA CCTCTTATTG GGTTTTATTG GGCTTCTCGT ATTAATCGGA
GGATCCAAAG GCATTCGGGC TATTCTTTCC CTGCTTGCAA CCTACTTTGC GATTATTTAC
GTTCTTTTTC CGCTTATTTT ACAAGGCTAT GATCCAACCT ATATTACGAT CGGTTTATGC
TCGGTTATCG CAATTTTTAC GTTGCTCTTA GTCGGAGGCC ATAATAAGAA AACTTTTGCC
GCTCTTATCG GAACCCTCTG CGGTCTCTGC GCTGCAGCCT ATCTTACAAT CACAATCGGC
GATTTAGCAC ATTTTACCGG AGCCATTGAT GAGGACTCCT ATCTGTTGGA ATATCTTCCC
CAAGATTCTA TATTCAGTTA TCAAGGCTTG TTTTTTGCCG GAATCATTAT CGGTTCTCTC
GGCGCGGTCA TGGATGTCAG CATGTCCATT GCTTCAGCCG TAAATGAATT GAAAGAAAAG
ACCTATTCGT TAAGTTCTTT CCAATTAATC AAAGCAGGTA TGAATGTCGG AAAAGACACC
ATTGGTACCA TGGCCAATAC CTTGATCTTG GCTTATACAG GCGGTTCCAT CTATATGCTG
CTCCTTTTAT CTGCCGAGAA TATATCTTTG CATCAGCTTA TCAACCGGGA AATCATTGCT
TCGGAAATCT TAAGGTCTAT GGCCGGAAGC ATCGGCCTTA CGATTACGGT TCCAATAACT
GCGATTGTTG CCGGCCTCCT TTTTCAACGG CAACATCCCT GA
 
Protein sequence
MKKNLYKYIV LGIIYIAFSF ISSSHICLAA AEISSSPSEK QEKMVRARII SIDLQKHQNS 
AQSVELITLE GAHKQQRFVT SFYATGIFYG ITLRENDEVF VTLFLNGDGA VEKVSITEIA
RDKYMTYLLL GFIGLLVLIG GSKGIRAILS LLATYFAIIY VLFPLILQGY DPTYITIGLC
SVIAIFTLLL VGGHNKKTFA ALIGTLCGLC AAAYLTITIG DLAHFTGAID EDSYLLEYLP
QDSIFSYQGL FFAGIIIGSL GAVMDVSMSI ASAVNELKEK TYSLSSFQLI KAGMNVGKDT
IGTMANTLIL AYTGGSIYML LLLSAENISL HQLINREIIA SEILRSMAGS IGLTITVPIT
AIVAGLLFQR QHP