| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1662 |
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| Symbol | |
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| ID | 7258631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1777269 |
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| End bp | 1778630 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643561564 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_002458144 |
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| Protein GI | 219667709 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGA CAGTACGCGA AATCGTTGCC GCCTGCGGCG GAAAATTACT CTGCGGGGAC
CCGGATACGA TGGTGACCTC GGTGGTGACC GACAGCCGGA AAGTGACCGA CGGTTCCCTG
TTTGTCCCCC TCAAAGGCGA AAAGGCGGAC GCCCACACCT TTCTGCACGC CGCATTCGCC
TCGGGTGCAG CCGCGGCACT GACCCAGGAG CATATGCGGA TGGAGGCGGA AGAAGCCTGG
ATCGCGGTGG ATTCGACTCA GCTGGCGCTC CAGCAGATTG CCGCCGCCTA TCGGCAGAGA
TTTTCCATCC CTGTCGTCGG GATCACAGGG AGCGCCGGGA AGACGACGAC GAAAGAAATG
ACCGCACTGG CACTTTCCGC AGGATACAAG GTGATGAAGA CGGGAGGAAA CCATAACAGC
CAGATCGGAC TGCCCCTGAT GATGTTTCAG TTTTCCTGGG AACACGAAGC GGCGGTGGTG
GAGATGGGGA TAAGCGATTT CGGCGAAATG GCGCGCCTGG CTCAGGTCGC CGAGCCGAAG
TACGCCGTCA TGACCAACCT CGGCATTACT CACATCGGCC AGCTCAAAAC CCAGGGGAAC
ATCCTGCGGG AGAAGCTGCA CATCACCGAC CGGTTCACTC AGGGTTCCGT TCTGTTTTTA
AACGGGGACG ATCCGATGCT GGCCGGACTC CGCGGCAAGA CAGGGTATGA GACCGTTTTT
TATGGCAGGT TGCCTTGGTG TGATTTTCGC GCGGAGGGGA TTACGGTTCA AGAGGAAACC
ACCGCTTTCC GCTGCCTTGC TCCGGGGAGC GAGAGCGTGG AGGTGACCCT GCCGGTACTG
GGAATGCACC ATGTTCTGGA TGCCCTGGCC GCTCTGGCCG TGGCGGAGCG GCTGGGCGTG
CCTCTGAAAC GGGCCGCCGC CGCACTCAGG GATTACCGCC CCCTGGCCAT GCGCCAGCAG
ATTTACCATG TCAATGAGGT TGCCGTCATT GATGATTCCT ACAACTCCAG TCCCGGCGCG
GCCAAAAGCA GCCTGAGTGT TCTTGCGGGG TTCCGGGCCG GCCGCAGAGT AGCCGTGCTG
GCGGATATGC TGGAACTGGG GGAGTATTCC CGGCAGGCGC ATTTTGAAGT CGGCGTCTGC
GCTGCGGAAA ACGGAGTGGA TATTTTACTC ACCGTCGGTC AGGAGGCGAA AGCCGTGGCC
GAGGGTGCCC GCTCCGTCCG GGCCGGGATC GACTGCCGCG TTTTGGACAA TAACTATCAG
GCCGCTGAGG AGTTGAAATC CTTTCTGTCT CCCGGTGACG CAGTTCTGGT CAAAGGCTCC
CGCGGCATGC ATACGGAGGA GATCGTCCGC GCCCTGCTTT AG
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| Protein sequence | MEMTVREIVA ACGGKLLCGD PDTMVTSVVT DSRKVTDGSL FVPLKGEKAD AHTFLHAAFA
SGAAAALTQE HMRMEAEEAW IAVDSTQLAL QQIAAAYRQR FSIPVVGITG SAGKTTTKEM
TALALSAGYK VMKTGGNHNS QIGLPLMMFQ FSWEHEAAVV EMGISDFGEM ARLAQVAEPK
YAVMTNLGIT HIGQLKTQGN ILREKLHITD RFTQGSVLFL NGDDPMLAGL RGKTGYETVF
YGRLPWCDFR AEGITVQEET TAFRCLAPGS ESVEVTLPVL GMHHVLDALA ALAVAERLGV
PLKRAAAALR DYRPLAMRQQ IYHVNEVAVI DDSYNSSPGA AKSSLSVLAG FRAGRRVAVL
ADMLELGEYS RQAHFEVGVC AAENGVDILL TVGQEAKAVA EGARSVRAGI DCRVLDNNYQ
AAEELKSFLS PGDAVLVKGS RGMHTEEIVR ALL
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