| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1652 |
|---|
| Symbol | |
|---|
| ID | 7258621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1764619 |
|---|
| End bp | 1765983 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643561554 |
|---|
| Product | MATE efflux family protein |
|---|
| Protein accession | YP_002458134 |
|---|
| Protein GI | 219667699 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000000778713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGGA ATTTAGAAAT GCGTGATGAG AAAATCGACA AACTTCTTTG GAAGTTCTCC
TTGCCGGCAA TTATCGGCAT GCTGGTCAAT GCTTTATACA ATATCGTGGA CCGAATCTTT
GTCGGACAGG GCGTCGGCTA TATTGGAATT GCCGCAACCA CGGTGGCTTT CCCGATTATG
ATTATCAATA TGGCTACTTC GATGCTGATC GCTATTGGCG CCACGGCCTT GATCTCCATT
CGTCTGGGTG AACAGAAAAA AGAAGAAGCA GAAAAAATTG CCGGCAATGC TACCGGACTG
CTTATTCTGC TGCCCTTGCT GCTCACCATT GTTTATCTCA TATTTACCGA CCCGATTCTG
AAATTGTTCG GTGCCAGTGC GGAAGTTCTG CCGTATGCCA GGGATTTTAC CCATATTATT
ATGCTGGGTT CAGTCTCCGG TTCCATTGCC TTTGGCATGA ACAACTTTAT CCGTGCTGAA
GGAAATCCCC GTTATGCCAT GCTCACTCAG ATCATCGGTG CAGTCTTGAA TGTCATTTTG
AATTATACTT TCATTTTCAA ACTGGGCTTG GGGATCAAAG GCTCAGCCCT GGCTTCCATC
TGCAGTCAAA CCGTCTCAGC GCTTTTTGTC CTGGGGTACT ACTTCACCAA CCGGAGCACG
ATTAAAATTC ACCTCAGAAA CCTTAAACCC CAACCATCTA TCGTTTTCAG CATTCTGGTG
ATCGGCTTTG CTCCCTTCGC TATGCAAATT GCCAACAGTA TTCAGCAAAC GATTTTAAAT
AAGACCCTGA TGGTCTATGG TGGTGATATA GCCCTTTCGG CCGTAGGCAT CATCATGAGC
ATCTCCACGA TCATCTTTAT GCCCATCGTC GGCATCAGCC AGGGCGCTCA GCCGCTTATC
GGCTTTAACT ACGGGGCCAA GCAGTATGAC CGGATCAAAG AAACCTTGAA GAAATCCGTT
CTTTTCAGCA CCATCCTGGC CGTCGTCGGC TATGTGGTGA TCCGGATCTG GCCTTATCAA
ATTATCGGTC TTTTCAGCAA AGATGATGTG GCTCTTACCC AACTTACCGT TCATGCCATG
TTGGTCTTCT TTGCGCTTTT GCCCCTGATC GGAATTCAAA TTCTCTGCTC CAGTTATTTT
CAGGCTGTGG GCAAGCCGCT TCAATCCACC TTGCTCAACT TATCCCGGCA GGTGCTGCTC
TTCATTCCGC TGCTTCTGAT TCTGCCGAAT TTTTGGGGAA TCGAAGGGGT ATGGAGAACA
GCTCCTATCG CCGATAGTTT AGCGGTCCTG ATTACCTCCA CCGTTATCCT TTTCGAGATG
AAAAAGCTTC CTAAAAGCGT GCCGATTCCC CAGGAAAGCG TCTAA
|
|---|
| Protein sequence | MNRNLEMRDE KIDKLLWKFS LPAIIGMLVN ALYNIVDRIF VGQGVGYIGI AATTVAFPIM
IINMATSMLI AIGATALISI RLGEQKKEEA EKIAGNATGL LILLPLLLTI VYLIFTDPIL
KLFGASAEVL PYARDFTHII MLGSVSGSIA FGMNNFIRAE GNPRYAMLTQ IIGAVLNVIL
NYTFIFKLGL GIKGSALASI CSQTVSALFV LGYYFTNRST IKIHLRNLKP QPSIVFSILV
IGFAPFAMQI ANSIQQTILN KTLMVYGGDI ALSAVGIIMS ISTIIFMPIV GISQGAQPLI
GFNYGAKQYD RIKETLKKSV LFSTILAVVG YVVIRIWPYQ IIGLFSKDDV ALTQLTVHAM
LVFFALLPLI GIQILCSSYF QAVGKPLQST LLNLSRQVLL FIPLLLILPN FWGIEGVWRT
APIADSLAVL ITSTVILFEM KKLPKSVPIP QESV
|
|---|
| |