| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1626 |
|---|
| Symbol | |
|---|
| ID | 7258595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 1737495 |
|---|
| End bp | 1738736 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643561528 |
|---|
| Product | transcriptional regulator, CdaR |
|---|
| Protein accession | YP_002458108 |
|---|
| Protein GI | 219667673 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3835] Sugar diacid utilization regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATC CTGACGGACT ATTCTATCAG CTCATTCAAG ATCTTGCTCA AGGTAAAGGG
TTGCCTCATT TAATCTGGCG CTTATCTCAA ATCCTTAACC GGCCGGTGCT GCTTACCAAT
TCAGTCCACC GCGTCCTGGT CTTCCATGAT CCCCATCATC TCAATCTTGA TTTAGATGAG
TTCTTATATG TTCCCCCTGT AAAACTCGAT GAAGCGGATT TTCTAAACCG CTCTGAACAT
AGTTTGCATC ATGGTCAGCT TACTTTAAAT GGTCAGGTTT TCCCCTTTGT TTATTTGCCC
TTGCTGGCCG GAGACTATTG CTTGGGCTAT ATTTTTGTTC TGGAAACCTA CCCCCTTGCC
GATTCACTAA AGCCAAAATC CCTGTCTGCA GAAGACAAGG AAACTATCTT CGAGGCCTCC
ATGCCCTTGC TGCTCTGCCT GAAAAACAGC AGTGAAGTCA GCTTAAGGCA AGAACAATAC
CGGGACGATT TCATTCGCGA TATCCTTTAC AACAATTATG ATTCGAAAGC AGCCATCCAT
GAAAAAGCAA AATCCTGGGG GTGGAATTTA CAAGGCTCCC TGCTTGCCCT GGTTATTGAC
TTGCCGGATC GAGATTTCAA AACGGCCCGG GAAATATTGC CCCGCTTATT TAACCACTCC
TCACCGATTA GCGCTTATAT CAACCTGCAA TTGGTGATTA TCCTCAATAT TAACGGGTTA
AAAAAGGTAA AGCTTAAGAC TGCCTTGAAT AATTTTATTA ACAGCTTTCT CGATCGGCTC
GCTGACCACG GAAAAGACCG TTCCTCCATC GGTATAGGAA TAGGCTCAGG AGTCCCTTCC
ATCACTGATT TATATAAAAG CTATCAGGAA GCCAAGGTCG CCTGGGAATT AGGAAAAGTC
TTTGATCATA AAAGCGTTTG CTACTTTGAA GAGATGGGGT TTCTTAAATT TATCTTTACC
CAGCCGGCCA GGGAGCTGGA GGAATTCAGC CAACGGGTTC TCGGTCCTCT GCTTGAATAC
GACCAGGCTG AAAATACAGG ATTGCTGGAC AGCCTCAGGG TATTTATCGA GTATAAATGT
CAGATTGCCG AATGTTCTAA AGCTCTCTAC GTTCATGAAA ATACCCTGCG CAACCGCATT
AAAAAAATCG AACAAGTAAC AGGCTTCGAC CTGCGCCGGG TTGATCATAT GGTCAATGTC
TATATTGCCT TACAGGTATT AAACTTGGGG AAAGATGATT AA
|
|---|
| Protein sequence | MTHPDGLFYQ LIQDLAQGKG LPHLIWRLSQ ILNRPVLLTN SVHRVLVFHD PHHLNLDLDE
FLYVPPVKLD EADFLNRSEH SLHHGQLTLN GQVFPFVYLP LLAGDYCLGY IFVLETYPLA
DSLKPKSLSA EDKETIFEAS MPLLLCLKNS SEVSLRQEQY RDDFIRDILY NNYDSKAAIH
EKAKSWGWNL QGSLLALVID LPDRDFKTAR EILPRLFNHS SPISAYINLQ LVIILNINGL
KKVKLKTALN NFINSFLDRL ADHGKDRSSI GIGIGSGVPS ITDLYKSYQE AKVAWELGKV
FDHKSVCYFE EMGFLKFIFT QPARELEEFS QRVLGPLLEY DQAENTGLLD SLRVFIEYKC
QIAECSKALY VHENTLRNRI KKIEQVTGFD LRRVDHMVNV YIALQVLNLG KDD
|
|---|
| |