Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1603 |
Symbol | |
ID | 7258572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1712461 |
End bp | 1713096 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643561508 |
Product | cobalamin B12-binding domain protein |
Protein accession | YP_002458088 |
Protein GI | 219667653 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000910131 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAA AGGCATTGAC GCAGGCCTTA GGTAATCTCG ACGGAGAATC AATGGAAAAA ATGCTGAATG AATTTGTTAC CTCAGAGCCC GGTGAAGCCG AGGTCAATAG TGTGGTTGGA GCGTGCCAGC AGGGTATGGC TATTGTTGGT GATTTATTTG GGAAAAACGA ATATTTTGTT GGCGATCTGA TCTATGCCGG CGAGCTGCTG AACAACGCAC TGGGCATTTT AAAACCGGTG ATTGGAGAGG CAAGCACGGA AAAAATCGGC AAAATGGTTT TAGGTACTGT TGAAGGTGAC TTGCATGATA TCGGCAAAAA TATCTTCAGA GGCATGATGG AAGCAGCCGG TTTTGAAGTT TATGATTTGG GCATTGATAT TCCCGCCGGC GTATTTGTAG AAAAAGTAAA AGAAATAAAG CCGCAGATCG TAGGGATGAG CGGTCTTTTG ACCCTGACGC TCGGCGCCAT GAAAGCTACG GTGGATGCCT TAACAGCCGC CGGCGTGCGT GACGGGATTA AAATCATTTT GGGAGGCAGC CCGGTAACGG AAGATGCCTG CAGGCATATT GGGGCGGATG CCTTCACGGT AAATGCCGCT GAAGGGGTAA AGATCTGCCA GGAATGGGTT AAATAA
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Protein sequence | MDLKALTQAL GNLDGESMEK MLNEFVTSEP GEAEVNSVVG ACQQGMAIVG DLFGKNEYFV GDLIYAGELL NNALGILKPV IGEASTEKIG KMVLGTVEGD LHDIGKNIFR GMMEAAGFEV YDLGIDIPAG VFVEKVKEIK PQIVGMSGLL TLTLGAMKAT VDALTAAGVR DGIKIILGGS PVTEDACRHI GADAFTVNAA EGVKICQEWV K
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