| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1529 |
|---|
| Symbol | |
|---|
| ID | 7258498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1631512 |
|---|
| End bp | 1632198 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643561437 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002458017 |
|---|
| Protein GI | 219667582 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA TCCTGATCAT CGAAGATGAT GTCAATATTG CCGAACTGGA ACGGGATTAC
CTGCAGCTTA ACGGCTACCA GGTCGATATC GTCCTGGATG GAGCAACGGG GCTGAAGAAA
GCTGTCTCCG GGACTTATGA TATTCTGATC GTCGATTTAA TGCTGCCCCA GCTGGACGGG
TTTGAGATCA TTAAAGAAGT CCGCAAGAAG TTGGAGATTC CCATTATCGT CCTGTCGGCC
CGCAGTGAAG ATATTGATAA AATCAGGGGA CTGGATTACG GTGCCGACGA TTATTTGACG
AAACCTTTCA GCCCCGCGGA GCTCATGGCC CGCATCCGAT CCCATTTGAA ACGATACGAA
CGTCTGACAG GTAAGCACCA GGGCATAGAG GTGATTAATC ACCGTGGGCT GGAAATCAAT
ACCGCCTCCC ATAAAGTCTA TGTCAATGGC AAAGAAGTTC AGTTCACCGC CAAGGAATAC
GAACTCCTGC TCTTCTTTGC TTCCAACCCG AATATACTTT TCAGCAAGGA GCGCATCTTT
GATCTGCTTT GGGGGGCGGA GTACTACGGG GATCTGGCAA CCGTCCCGGT TCATATTCAA
AAGATCAGGA AGAAAATCGA AAGAGACCCG GCCAACCCGG AATATATAGA GACCGTCTGG
GGAACCGGCT ATCGGTTTAA TCCGTAA
|
|---|
| Protein sequence | MKNILIIEDD VNIAELERDY LQLNGYQVDI VLDGATGLKK AVSGTYDILI VDLMLPQLDG
FEIIKEVRKK LEIPIIVLSA RSEDIDKIRG LDYGADDYLT KPFSPAELMA RIRSHLKRYE
RLTGKHQGIE VINHRGLEIN TASHKVYVNG KEVQFTAKEY ELLLFFASNP NILFSKERIF
DLLWGAEYYG DLATVPVHIQ KIRKKIERDP ANPEYIETVW GTGYRFNP
|
|---|
| |