| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1454 |
|---|
| Symbol | |
|---|
| ID | 7258423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1546858 |
|---|
| End bp | 1547355 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643561363 |
|---|
| Product | phage terminase, small subunit, , P27 family |
|---|
| Protein accession | YP_002457943 |
|---|
| Protein GI | 219667508 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3747] Phage terminase, small subunit |
|---|
| TIGRFAM ID | [TIGR01558] phage terminase, small subunit, putative, P27 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGAC GCAAAAGAAA ATCAGTGGAT TTATTAATCG CTGAAGGTAA AACACATTTG
ACCAAAGACG ATATTGAAAA AAGAAGAGAA GCGGAAAGCC AGCTTAAGCC AAAGGATGAT
AAAATAAAAT GCCCATCTTG GTTAAAGGAC AAGGTTGCTA AAAGTGAGTT TAGAAAAATC
AGTCATGAGT TGCAAGAATT AAAGCTGCTT ACTAATTTAG ACGTCAATAC TTTAGCAAGT
TATTGTGTAG CATATGCCCA ATATCTCAAG GCTACATCAG AGCTTGCAGA TCAGGATTTA
GTGATAACTC AGACCAATAA AGCTGGCTTT ACAAATATGG TAGAAAACCC CTTAATCCGC
ATCCAATTAA AATATTCTAA TGAAATGAAA AAACATGCCG CTGAAATGGG ATTAACCATT
AACTCACGGC TAAAATTGGT CATTCCTAAA AAGGAAGCGA AACGAGATCC CATTGAAGAG
GATTTCGGTG ATATCTAG
|
|---|
| Protein sequence | MSGRKRKSVD LLIAEGKTHL TKDDIEKRRE AESQLKPKDD KIKCPSWLKD KVAKSEFRKI
SHELQELKLL TNLDVNTLAS YCVAYAQYLK ATSELADQDL VITQTNKAGF TNMVENPLIR
IQLKYSNEMK KHAAEMGLTI NSRLKLVIPK KEAKRDPIEE DFGDI
|
|---|
| |