Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1271 |
Symbol | |
ID | 7258241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1367759 |
End bp | 1369360 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643561184 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_002457764 |
Protein GI | 219667329 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000259985 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGT ATAATAAAAA GTGGACAGTT TTAGGTATGC TGATCATGAG TCTAGCCCTT GTTCTGGCAG GTTGCGGCGG AAGCAATGCA GCGGTTACCA AAGAAAAGAC CAACAAAGAT GAACTGGTTA TTTATATAGG GTATGGAATG ACCAGCGGCG GTTATGATCC CTGCACCGGG TACGGCATCT ACGGGGACGG AATTTTTCAT AGCAACCTGC TGAAATTCAA TGCCCAAATC GAAGCAGAGC CTGATTTGGC TGTCGGCTAT ACAGTCAGTG ACGATGGCTT AACCTATACA TATACTCTTC GCGATGATGT GAAATTCTCC GATGGAGAAC CTTTGACTGC CGATGATGTG GCCTTTACCT ATATGACCGC CAAAGCAAGC GGTTCCAGCG TGGATTTGAC AATGCTGGAA AAAGCCGAAG CTAAAGATAA AGTTACCGTT GTCTTTACCC TGAATAAGAA ATGGTCGGCC TTTGCCTCCA CCACAGCCCT GCTGGGCATT GTTCCGGAGC ATGCTTACGG GCCGGGTTAC GGGGACAATC CCATCGGGAC AGGCCCCTTT AAGGTAGCTC AATTGGATAA AGAGCAGCAG CTCATCGTCG TCCCCAATGA TTATTACTAT GGAACCAAGC CCGCCTTTAA AAAGATCACC ATTCTGAACC TGGATGAGGA GGCCGCCTTA GCGGCAGCCA AATCAGGAAA TCTGGATGTG GTCATGGTCA ATCCTGAATA TGCCTACGAA GAAGTTCCGG GTATGAGCAT GGCGAGGATT AAGACTGTGG ATAATCGGGG ATTTAATTTG CCCGTCATAG GGGAGACCAA GGATGGCAAG GGCAATGTGA TCGGCAACAA TGTCACCAGT GATTATGCTG TGCGCAAGGC CTTAAACATT GGCATTGACC GGGAAACTAT TATCCAAAAC GCTCTTAACG GGATCGGAAC CCCTGCCTAC GGCCGGGTGG ATGCTTTGCC CTGGAACAAC ACTCCTGAAT TCGAAGATGG CCGGGTGGAA GAAGCAAAAG CTCTCTTGGC AGAAGCGGGC TGGATCGATA CTGATGGAGA CGGCATTCGG GAGAAGAATG GAATTAAGGC TGAATTCAAG ATTTCCGGAA GAACCGATGA TTTACAGCGC TATAATCTGG CTGTGGCGTT GAGCGAAGAT GCCAAGAAGC TGGGCATTAA TCTTATCGCC GAAGCATTGG CCTGGGCCGA CTGTAAAGCC CTGACCCGCA CTATACCCAC CTGTTGGGGA AGCGGTGACT ATAATCCGAT CGACCTTTAC AATGCTCACT ATTCTCAGAT GATTGGCGTC GGAACCAGCA ATCCTGCCTC CTATGCCAAT CCCAAAGTGG ATGACTATAT CGAGAAAGCC TTGGCGGCAA CCAGCATGGC AGAAGCCATA GACTATTGGA AGCTATCCCA GTGGGATGGC GAGACAGGAA CCAGCGTCGA TTATCCCTTC CTGTGGATTG TCAATATCGA CCACACTTAT TTTGTACGGG ATGGGTTAAG CCTCGGCGAG CAGCGGATTC ACCCCCATGG CCATGGAGTG CCGGTTATCG CCAATCTGAA TGAGTGGACC TTTGAATCCT GA
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Protein sequence | MKRYNKKWTV LGMLIMSLAL VLAGCGGSNA AVTKEKTNKD ELVIYIGYGM TSGGYDPCTG YGIYGDGIFH SNLLKFNAQI EAEPDLAVGY TVSDDGLTYT YTLRDDVKFS DGEPLTADDV AFTYMTAKAS GSSVDLTMLE KAEAKDKVTV VFTLNKKWSA FASTTALLGI VPEHAYGPGY GDNPIGTGPF KVAQLDKEQQ LIVVPNDYYY GTKPAFKKIT ILNLDEEAAL AAAKSGNLDV VMVNPEYAYE EVPGMSMARI KTVDNRGFNL PVIGETKDGK GNVIGNNVTS DYAVRKALNI GIDRETIIQN ALNGIGTPAY GRVDALPWNN TPEFEDGRVE EAKALLAEAG WIDTDGDGIR EKNGIKAEFK ISGRTDDLQR YNLAVALSED AKKLGINLIA EALAWADCKA LTRTIPTCWG SGDYNPIDLY NAHYSQMIGV GTSNPASYAN PKVDDYIEKA LAATSMAEAI DYWKLSQWDG ETGTSVDYPF LWIVNIDHTY FVRDGLSLGE QRIHPHGHGV PVIANLNEWT FES
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