Gene Dhaf_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1245 
Symbol 
ID7258215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1340132 
End bp1341133 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content54% 
IMG OID643561158 
Product4-hydroxy-2-oxovalerate aldolase 
Protein accessionYP_002457738 
Protein GI219667303 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR03217] 4-hydroxy-2-oxovalerate aldolase 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAG TTAAAATCTT TGATCTAACC CTACGCGATG GCAGCCATGC CAAAAGCCAT 
CAGTTCACAC CGGAACAAAT GGCTGTTCTG GCTGAACAAA TAGACAGTAC CGGGGTGGCG 
GCAATTGAAT TCGGACATGG CAACGGGCTG GGCGGCTCAG CTCTGCAGTA CGGGTTTGCG 
GCGGCTACGG ACAGGGAGTA TATGGAGGCT GTGGCTCCCG TAGTTAAAAA CGCCGATCTA 
TCGATTATTA TTCTGCCCGG AGTGGGTACC CGGCATGAGC TGCATCTGGC TAAGGAGTTC 
GGTGCCAAAT ATGCGCGCAT GTGCACCCAG ATCACCGAGG TGGATATCGC GGAGCAGCAT 
ATCAAGATGG CCAAACAGTT AGGTATGATT CCTATAGCCG TTCTGCCCTG CGCGGGGATT 
ATCCCGGTTA AGGATACGGT GCGCTATACC CAAATGGCCG AGTCCTATGG CGCTGAAGTG 
ATTTATCTGC TTGATGGGGG CGGATATCAG CTCCCCGAGC AAACCTACGA GAGGATCGCC 
GCCATGAAAA AAGCGGTGGA TGTTCCCATC GGTTTTCACG GGCACAACAA TCTGCAGCTG 
GCTGTGGCTA ATTCCAAAGC GGCAGTTGAA GCAGGCGCCG AATATATTGA TTGCTGCCTG 
AAAGGGTTTG GCGCCGGAGC AGGCAATTGC CCCACAGAAA TATTCGCCGC CGTTATGGAT 
CGCATGGAGA TCGACTGCGG AATCGATCTG TACAAGACCA TGGATATCGC CGAACAATAC 
TTAAGGCCGC TGATGCCGCG GGCTATGGAA GTGGACAATG ACCGGATCAT GCTGGGATAT 
GCCGGATGCT ACTCCAGCTT CCTGCTGTTC GCGCAGAGAG CCGGAGCCCG CTACGGTGTG 
GACCCCAGGG ATATCATTAA AGAGATCGGC AGACGTCAGT GCACGGAAGG GCAGGAAGAT 
ATCTGCATCG ATGTGGCCTA TGCCTTGGCG CAGAAGAAAT AA
 
Protein sequence
MKKVKIFDLT LRDGSHAKSH QFTPEQMAVL AEQIDSTGVA AIEFGHGNGL GGSALQYGFA 
AATDREYMEA VAPVVKNADL SIIILPGVGT RHELHLAKEF GAKYARMCTQ ITEVDIAEQH 
IKMAKQLGMI PIAVLPCAGI IPVKDTVRYT QMAESYGAEV IYLLDGGGYQ LPEQTYERIA 
AMKKAVDVPI GFHGHNNLQL AVANSKAAVE AGAEYIDCCL KGFGAGAGNC PTEIFAAVMD 
RMEIDCGIDL YKTMDIAEQY LRPLMPRAME VDNDRIMLGY AGCYSSFLLF AQRAGARYGV 
DPRDIIKEIG RRQCTEGQED ICIDVAYALA QKK