| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1243 |
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| Symbol | |
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| ID | 7258213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1337849 |
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| End bp | 1339168 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643561156 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002457736 |
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| Protein GI | 219667301 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.160204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAA CAACAATCGT AATCATTATG ATGGTCGTAT TCATAAGCAT ATTGCTGCTG
GGCCATCCTC TCTCCTGGAT TTTAGGCGGC TTGGGCGTTA TTTTCGGAGT CTTCTTTTGG
GGCGATTTAA ATGTTTTAAA TATCTTTACG CGAGCGGTTT ATAAGGTCGT AACGACAAGC
TCCTATGTAT GCATACCCTT GTTTATCTTT ATGGGCGCAC TTTTGGAAAA GTCCGGATCG
GCCGATAAGC TGTTTGATTC GCTTTATATC GTTTTCGGCA GGCTTAAAGG CGGCTTGGCC
CTTGCAACCG TTGTGATTTC AGCTTTGATG GGAGCCGCAA CCGGCATTAT CGGCGCTTCA
ATTTCCATTA TGGCTATGCT GGCGCTGCCG ACGATGCTCA AACACCGGTA TGAGGAAAAA
CTGGCCTGCG GTACGGTTAT GGCGGCAGGC AGCTTGGGCA CGCTGATTCC GCCGAGCGTT
ATTCTGGTCA TTTACGGTTC CCTGTCCAAC TTGTCGATTG CCAAATTGTT TGCGGGCGGT
ATGGGCGCAG GTATCTGCCT GGCCGCGATT TATAGCATAT ATGTGGTGGT ATTGTCTTAT
ATCAAACCGT CTTACGGTCC GCCGATTTCC AAAGAAGAGA GCCAGAAATA TTCGGCGGGG
CAAAAGGCTG CAATGATCCT TGTCTCCGTG GTACCGACTC TCAGCTTGAT TTTGCTGGTT
TTAGGGTCGA TTCTGCTTGG AGCGGCTACG CCGAACGAGG CTTCCGCTCT GGGGTGCGTC
GGCGCGATGA TTATCGCGAT CATGTATAAA AACTTCAACT GGAAAATGTT TAAAGAATCG
TGCTTTTCCA CAATGAAAAC AACATCTATG ATTATGTGGA TTATTGTTTG TGCCACTATG
TTCACCTCTA TTTTCATCGG CCTGGGCGGT GATAAAGTGA TCGCTGACAT GGTCGTGGGC
GTTGGTGAGA ACAAATGGGT CATTTTATCC GTTATTCTTG TTCTGCTCGT GGCAATGGGA
ATGCTGCTGG ATTCTTATGG CGTACTGTTA ATCGGGGTTC CGCTGTTTAC GCCAATCGTC
TATTCGCTGG GCTTTGATCC GATCTGGTTC GGTATTATAT TCACGCTGAT GATTCAGGTC
TCGGTGCTGT CGCCGCCGGT GGCTTATGCG GTTTTCTATA TGAAAGGGTT TGTTCCGCAT
ATTCCGATAG GCAAATTGTA TTGGGCGGTT ATACCGTTCA TGGCCATGCA GATTATCTGT
ATTATTCTTT GCTGCATTTT CCCCGATATC ATTATGTTCC TGCCTAACAG GATGCAATAA
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| Protein sequence | MSTTTIVIIM MVVFISILLL GHPLSWILGG LGVIFGVFFW GDLNVLNIFT RAVYKVVTTS
SYVCIPLFIF MGALLEKSGS ADKLFDSLYI VFGRLKGGLA LATVVISALM GAATGIIGAS
ISIMAMLALP TMLKHRYEEK LACGTVMAAG SLGTLIPPSV ILVIYGSLSN LSIAKLFAGG
MGAGICLAAI YSIYVVVLSY IKPSYGPPIS KEESQKYSAG QKAAMILVSV VPTLSLILLV
LGSILLGAAT PNEASALGCV GAMIIAIMYK NFNWKMFKES CFSTMKTTSM IMWIIVCATM
FTSIFIGLGG DKVIADMVVG VGENKWVILS VILVLLVAMG MLLDSYGVLL IGVPLFTPIV
YSLGFDPIWF GIIFTLMIQV SVLSPPVAYA VFYMKGFVPH IPIGKLYWAV IPFMAMQIIC
IILCCIFPDI IMFLPNRMQ
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