| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1014 |
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| Symbol | |
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| ID | 7257982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 1105888 |
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| End bp | 1107825 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643560928 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002457510 |
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| Protein GI | 219667075 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTATA CCCAGGAAGA AATTCTTGAG GCTTGGAAGA ACTTTATAGT CCGCGGAGTG
AGCCAGGAAG ACAAAGTTCA TCCTTCTGTG GCCCGCTCAT GGGAACGATG CCGGAAGCTT
GGCCTTGATC CCTGGTCAAC GGAATTTCCT AAATGCGACC CCTCCTTGTT GCAGAAAAAA
AGAACCCAAT ATGCAGAATT ACTGTCTTTA GCGGCTCCGG TTATGAACTA TCTTTATACT
TTGCTGGATT GCAACATCAG CATCTGCGAT TCTGATGGGT TTGTTTTTGA GTTGATTACC
CCGTTAAAAA ACTACCCCCG GACTTTAGGA GCCTATACCG ATGAAGCGAC TTGTGGTAAC
GGCGCTGTCA CTATCGCCCT AAAGGAAAAA ATCCCCATGA GAACCGACGG CTATGAGCAT
TACCGCATTA TCAGTCAGAA CCATTCCGGT GTGAGTTCTC CGATTATGAT CGACAATGCA
TTGGTTGCCG TCCTCAATGG GGTCAATCCC TTTGGCAGCC TTCACGATAA AGCCCTTGCC
ATGACTATCA CTGCAGCTAA ACTCATCGAA TATTGTCTGA TGGCAGGGCC TAAACCCGCT
AAACCTCTTG AACTCAGACC TCGGATCAAA ACAATGATCG ATGATTGTTC CAGCCCGGTT
CTTGTTCTGG AGCATGATGG GACAATCTAT ACAGCCAACC ATGTTTTCGC AAGCTCTTTG
GCCGGTTCCG ACACAACCGG CAAGTCTTTA GGGAACTATC TTGCTGACAA ACATGATTTG
AATCGTCTCC TCGCCAACAA TTACGAACAA CCCAGTGAAG AAATTGAGTT TAAAACAAAT
TTCACACCCC ATAAAAGAGA AACCTTCCGC TGCCGGCTGC TCAGAAAACG GCAGATTCGG
CTTCTTAGCG GTGAAGTCCA TACCCTGCTT ATTTTTAAAA AGCAAGGCCC CGTTTCTATT
CCCCATAAGC TCTCCAAACC TCATGGGATT GACTATATCG GTGAAAGCAC CGCTTGGTCC
AAGGTAGACA GCATCGTTCA AAAAACCGCC AAATTCCCAT CCAATGTGTT GCTGTTGGGG
GAAACCGGGA CAGGCAAAGA AGTGGTGGCT AAAGCCATCC ATCAACGCAG TGGACGGAAA
GGCAATTTTG TAGCTATCAA TTGCGGAGCA CTGCCCAAGG ATTTGCTTCA TAGTGAACTT
TTTGGCTATG AAGAAGGGGC TTTTACCGGT GCTCGTGCCC ATGGTTCCAT CGGAAAATTC
GAGCATGCTC ATGAAGGAAC CCTGCTTCTG GACGAAATAG GAGAAATGCC CCTGGACATG
CAGGTAACTC TCCTGAGATT CCTCCAGGAA CGGACCATCA CGCGGATAAA CTCCAATAAG
CCCAAAAAAG TGGATGTGCG CATTATCGCC GCAACCAATA AAGATATGGC AGAGCTGGTC
AGACTGGGGC AATTCCGTCA GGATCTCTAT TATCGGCTCA ACGTCATTGA GATCAACCTG
CCGCCGCTCC ATGAACGAAA GTGCGATATT CCTTTATTGG CGGAATATTT TATATCCGAA
TTATCCAGGC AGTATAATGT TCCATCCAAA CAAATTCATC CGGCTGCTCT GCAAATCCTT
TGCGGCTACA GTTGGCCGGG AAATGTCAGA GAGTTAAAAA ACGTCATTGA AAAAGCGTTG
ATCTTGTCCG AAGGCCTAGA AATTACTCCC GACTTTTTAC CTGAATATAT TTTGCCTTCT
CAAAATGCGA CCTCTCAATC CATACCATCT ACTTCCCGAA TCGGGGAATC AGAACGGGAA
CACATCATCA ACCTGCTGGA AAGCTATAAC GGCAATATCT TTCAAACGGC AAAAGCCTTA
AAGATGTCCC GCAACACCTT GTACCGCAAA ATTGAAAAAT ACAATATTCA ACTAAAAACT
TCAGCAGTGA AAAAGTAA
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| Protein sequence | MHYTQEEILE AWKNFIVRGV SQEDKVHPSV ARSWERCRKL GLDPWSTEFP KCDPSLLQKK
RTQYAELLSL AAPVMNYLYT LLDCNISICD SDGFVFELIT PLKNYPRTLG AYTDEATCGN
GAVTIALKEK IPMRTDGYEH YRIISQNHSG VSSPIMIDNA LVAVLNGVNP FGSLHDKALA
MTITAAKLIE YCLMAGPKPA KPLELRPRIK TMIDDCSSPV LVLEHDGTIY TANHVFASSL
AGSDTTGKSL GNYLADKHDL NRLLANNYEQ PSEEIEFKTN FTPHKRETFR CRLLRKRQIR
LLSGEVHTLL IFKKQGPVSI PHKLSKPHGI DYIGESTAWS KVDSIVQKTA KFPSNVLLLG
ETGTGKEVVA KAIHQRSGRK GNFVAINCGA LPKDLLHSEL FGYEEGAFTG ARAHGSIGKF
EHAHEGTLLL DEIGEMPLDM QVTLLRFLQE RTITRINSNK PKKVDVRIIA ATNKDMAELV
RLGQFRQDLY YRLNVIEINL PPLHERKCDI PLLAEYFISE LSRQYNVPSK QIHPAALQIL
CGYSWPGNVR ELKNVIEKAL ILSEGLEITP DFLPEYILPS QNATSQSIPS TSRIGESERE
HIINLLESYN GNIFQTAKAL KMSRNTLYRK IEKYNIQLKT SAVKK
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