Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0947 |
Symbol | |
ID | 7257916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1042152 |
End bp | 1043669 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643560864 |
Product | glutamate synthase, NADH/NADPH, small subunit |
Protein accession | YP_002457446 |
Protein GI | 219667011 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAG CAACAGGTTT TTTAGAGTAT CAGAGAATTG ACCCAAAGAA GCGTGCTCCT GAGGAGCGTA TTCAGGACTG GCGGGAGATT AAGCTGCCCA GAGACCCTGA GGTGATTAAG ACCCAGGGTG CCCGCTGTAT GAATTGTGGC GTTCCCTTCT GCAATGGGGG GGTCGTGCTC AATGGCATGG TTTCGGGCTG CCCGCTGCAT AATTTGATTC CGGACTGGAA TGAACTGATT TATAAAGGGC AATGGGAAGA AGCTTATCGG CGTTTAAGCC GTACCAGTCC CTTCTCGGAA TTCACATCCC GGGTTTGCCC TGCGCCCTGT GAAGGAGCCT GCACCGAAGG CTATATTATG GAGCCGGTAA CTATCAACTG TATAGAGTAT GAAATCATCG AGAAGGCCTT TGCCGAAGGA TGGGTAAAGC CCAAAAAAGG GAAAGTCACC GGTAAAAGGG TGGCGGTGGT GGGTTCCGGC CCCGCGGGAC TATCGGCAGC GAATTATCTC AATGCCGTGG GCCATGAGGT CACGGTGTAT GAGCGGGCCG ACCGCCCCGG CGGACTCCTC ATGTACGGCA TTCCCAACAT GAAGCTGGAG AAAAACGTGG TGGAGCGGCG CATAAACTTA ATGAAGGAAT CCGGTATCCA CTTTGTCCTT AATACCGAGG TGGGCAGGGA TGTTCCAGCT CAGGATCTGG TGAATCAATA TGATGCGGTG GTTCTTTGCA TCGGTGCCAC CAAGGCCAGG GGGCTCAACG TGGAAGGCCG TGATCTGAAA GGGGTCCACT ATGCGGTGGA TTTCCTGAAG GCCAACACCA AAAGCCTGCT GGACTCCAAT TTTGAAGGCT TGGAAACCAT GGCTGAGAAA GATGGCCAGG AGGGCGGCTG GATCAGTGCC CAAGGAAAAA ACGTTATCAT CATCGGCGGT GGAGACACGG GAACGGATTG TGTCGCGACC TCCATCCGTC ATGGTTGCAA AAGCGTCCAC CAATTCGAGA TTATGCCCGA GCCCCCTGCC AAACGAATCG AGGCCACCAA TCCCTGGCCG GAGTGGCCCA AAAAGCTTAA AGTTGACTAC GGTCAGGAAG AAGCCATCAG TCTCTACGGA AAAGATCCCC GTCATTACCT TATCAATACG AAAAAGATCG TGGGCAACGA GCAAGGTGAG GTTAAGGAAG TTCATACCGT AGAAGTCCAC TGGATTAAAG ATTCCTCAGG AAGAATGGTT CCCCAGGAAG TGCCCGGCAG CGAGAAAGTA TGGGAAGCAG ATTTGGTCCT TTTGGCCATG GGTTTCCTCG GCCCGGAAGA TGCTATACCC AATGAGCTGA ATCTTGAGCG GGATGAGCGC AGCAACCTTA AAGCGGTGTA TGAAGAGTTT GAAACCAATG TGGAAAAGGT TTTTGCTGCA GGAGATGCCC GAAGAGGGCA GAGCCTGGTG GTCTCGGCTC TCCAGGAAGG GAAGCTGGCC GCCCGTGAGG TGGATAAGTA TTTGATGGGA AGGAGCGGGA TTAGGTAA
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Protein sequence | MGKATGFLEY QRIDPKKRAP EERIQDWREI KLPRDPEVIK TQGARCMNCG VPFCNGGVVL NGMVSGCPLH NLIPDWNELI YKGQWEEAYR RLSRTSPFSE FTSRVCPAPC EGACTEGYIM EPVTINCIEY EIIEKAFAEG WVKPKKGKVT GKRVAVVGSG PAGLSAANYL NAVGHEVTVY ERADRPGGLL MYGIPNMKLE KNVVERRINL MKESGIHFVL NTEVGRDVPA QDLVNQYDAV VLCIGATKAR GLNVEGRDLK GVHYAVDFLK ANTKSLLDSN FEGLETMAEK DGQEGGWISA QGKNVIIIGG GDTGTDCVAT SIRHGCKSVH QFEIMPEPPA KRIEATNPWP EWPKKLKVDY GQEEAISLYG KDPRHYLINT KKIVGNEQGE VKEVHTVEVH WIKDSSGRMV PQEVPGSEKV WEADLVLLAM GFLGPEDAIP NELNLERDER SNLKAVYEEF ETNVEKVFAA GDARRGQSLV VSALQEGKLA AREVDKYLMG RSGIR
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