Gene Dhaf_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0901 
Symbol 
ID7257870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp992173 
End bp993069 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content50% 
IMG OID643560818 
ProductCitrate (pro-3S)-lyase 
Protein accessionYP_002457400 
Protein GI219666965 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTA TGAGATCAGT GCTGTTTGTC GCGGGAAATG ATAAGGAGGC TCTGGATGAG 
GCCTTAACCT ATGGAGCAGA TGCACTTATT TTGGATCTGG AGGACTTGGT GCCACCGTTG
GAAAAATCTA GAGCACGCCG AATGGTGCGC GTGAATATTA AGCATGCAGG CTCTCAAGGA
GCCGAGGTAT GGGTTCGGGT GAATGCCTGG GAAACGAATA TGACTGATGA TGACCTGGAA
GCCGCAGTAT GTGAAGGCCT GACAGGAATC AATCTGACCA AGGTTGCCGG TGCCGGCGAT
GTACAACGTC TGGCGTGGAG GCTTGAAGAA TTGGAACGGA AGAATGGTTT GGCCGTAGGC
AGCATCAAGA TCTGCCTGCT TATTGAGACA GCCATAGGGG TCATCAACGC CTATGAGTCT
TGTGCCGCCA GCCCTCGTGT TGCGGCAGCC ATTTTTGGAG CTGTAGATTA TACCCGCGAT
ATGCAGGTTA AACTGACCCC TGAAGCCAAA GAGCAGCAGT TTGCCCGGGG TTATGTGGCC
GTTGCGGCTC GTGCTGCCGG TGTTATAGCC CTTGATGCAC CATTTCTTAA TTACACCGAT
AAAGAAGGCT ATGTGCATAA CATAGCCGAA GGACGCCAGT TGGGGTATAA AGGCCGGATG
ATTGTTCACC CCAGCCTTGT GGAGGCTGCT AACCGTCTTT ATGCTCCTGA TCCGGAGGAT
GTACAATGGG CCGGAGAGAT TAAGAAAGTT TTCGAGGAAG AAGCTATTGC TAAGGGGAAA
GCAGCAATCG TTTATAAGGA TAAGCTGGTG GATACTCCTG TGTATAGCAA TGCTCTCGAC
ATTCTTGCAA ATCAGGCTGA GATTGATGCC AAGCTGGGGA TAAGCATACA GGAATAA
 
Protein sequence
MAIMRSVLFV AGNDKEALDE ALTYGADALI LDLEDLVPPL EKSRARRMVR VNIKHAGSQG 
AEVWVRVNAW ETNMTDDDLE AAVCEGLTGI NLTKVAGAGD VQRLAWRLEE LERKNGLAVG
SIKICLLIET AIGVINAYES CAASPRVAAA IFGAVDYTRD MQVKLTPEAK EQQFARGYVA
VAARAAGVIA LDAPFLNYTD KEGYVHNIAE GRQLGYKGRM IVHPSLVEAA NRLYAPDPED
VQWAGEIKKV FEEEAIAKGK AAIVYKDKLV DTPVYSNALD ILANQAEIDA KLGISIQE