Gene Dhaf_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0877 
Symbol 
ID7257846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp967161 
End bp967943 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content45% 
IMG OID643560794 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002457376 
Protein GI219666941 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000112184 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATGAAAA GGTTACAAAG CATCACCAAT AAGCTTTACC CAACGGCTGT ACTTCTGATC 
TTGCTTATCT TCTGGTATCT GGTGACTCTT CTTGAAATGG TGCCAAAATT CATGCTACCA
TCCCCTGGGG ATGTGATTCG GGCTTTAGCA GGTTCTTTTC CTGAGCTTAT GAAGCACGCC
CAGATCACCT TGACGGAGGC TTTCATAGGA TTAGCTCTTA GTATTCTTTT GGCTTTTTGG
ATTGCGCTTT TGATGGATCG TTTCGATGCT CTTTATAAAG CCTTCCATCC TATCCTGGTA
ATTACTCAGA CTATTCCCAC GGTAGCCATA GCCCCTTTGT TGGTGTTATG GCTGGGCTAT
GATATGGCGC CGAAGATTAC GCTTGTTGTT CTGACCTGTT TTTTCCCTAT GACCATTGCT
CTTTTAGGTG GATTTAAATC GTCGGATCAA GACGCTATGA ATCTCATGCG AGCTATGGGG
GCTAAAAAGT GGCAGATCTA CCGGTATATT AAGCTGCCTA ATGCTCTGCC CGGCTTTTTC
TCAGGTTTAC GTATCTCGGT GTCCTATTCT ATTGTCGGCG CAGTTATTGC TGAATGGCTG
GGAGGAAACA GTGGTCTTGG CGTGTATATG ACCCGGGTCA GAAAATCCTA TTCTTTTGAT
AAAATGTTCG CGGTGATTTT TTTGATCATC ATATTGAGCT TAGTGCTTAT GAAATGTGTG
GAGCTTTTGG AACGAAAAGC TATGCCCTGG GCACAGACCG GGGAACAGCA AAATGAAGGC
TGA
 
Protein sequence
MMKRLQSITN KLYPTAVLLI LLIFWYLVTL LEMVPKFMLP SPGDVIRALA GSFPELMKHA 
QITLTEAFIG LALSILLAFW IALLMDRFDA LYKAFHPILV ITQTIPTVAI APLLVLWLGY
DMAPKITLVV LTCFFPMTIA LLGGFKSSDQ DAMNLMRAMG AKKWQIYRYI KLPNALPGFF
SGLRISVSYS IVGAVIAEWL GGNSGLGVYM TRVRKSYSFD KMFAVIFLII ILSLVLMKCV
ELLERKAMPW AQTGEQQNEG