Gene Dhaf_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0875 
Symbol 
ID7257844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp965822 
End bp966616 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content47% 
IMG OID643560792 
Productprotein of unknown function DUF477 
Protein accessionYP_002457374 
Protein GI219666939 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000594367 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGAA TGAAGCCCAT GAAGAGGAAA CTCCTGCTTG CCGGATTGGT ACTGTTCTTC 
CTTACTTTAG CTTTTCCTTT GCAGGCGACT ACCCCTTCGA TCCCGCAGCC CACCCGTGAT
TTTTTTGTGC TGGATGAAGC CAATGTTCTC GACTCAAACA CTGAGAGAAT TATTGTCCAA
AACTCGGCGG AATTGGAGAA AAGGACCAAG GCACAGATCG TAGTGGTTAC AGTCAACGAT
CTGAAAGGAT ATGGGCCGGA AGAATATGCT CTATCCATCT TGAGAGAATG GGGGATCGGT
GATAAAAAGC TAAACAACGG GTTACTGATC TTAGTATCCC CTACGGAGGG GGAGGCCAGG
ATAGAGGTGG GTTATGGCTT GGAAGGGGCT CTTCCCGATG CTAAAACCGG CCAAATTCAA
GATGAATACA TGATTCCCTA TTTTCAAGAA GGAGATTATA ACCAAGGCAT CTTAAATGGT
TATCGAGCCT TTGTTCAGGA AGTTGCTAAA GAGTATCAAG TTGTGATGAA TATTGACTCT
CCTAAGGCTT TGTCTACTTC GTCTGATTAT GGAGATGGAA CCGATACTTT TGCTTCCCTG
CCTCTTGGGG TTAAAATTCT AGCCTTTTTC GGTATCGTTT TCCTATTTTA TATTGACCAC
CGTTATTTTA ACGGCTTTAT CTTCGGCATG ATTATCGGCA TGCTCATGAG AGGTGGCCGC
GGTGGCGGAG GCGGAGGAGG ATTCGGAGGC GGTGGGGGTT CCGGCGGTGG CGGAGGCAGT
ACACGACGTT GGTAA
 
Protein sequence
MKGMKPMKRK LLLAGLVLFF LTLAFPLQAT TPSIPQPTRD FFVLDEANVL DSNTERIIVQ 
NSAELEKRTK AQIVVVTVND LKGYGPEEYA LSILREWGIG DKKLNNGLLI LVSPTEGEAR
IEVGYGLEGA LPDAKTGQIQ DEYMIPYFQE GDYNQGILNG YRAFVQEVAK EYQVVMNIDS
PKALSTSSDY GDGTDTFASL PLGVKILAFF GIVFLFYIDH RYFNGFIFGM IIGMLMRGGR
GGGGGGGFGG GGGSGGGGGS TRRW