| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0813 |
|---|
| Symbol | |
|---|
| ID | 7257781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 904522 |
|---|
| End bp | 905796 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643560729 |
|---|
| Product | hydrogenase large subunit domain protein |
|---|
| Protein accession | YP_002457312 |
|---|
| Protein GI | 219666877 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.128167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC TAACCTATGA AGAAATATTC GGCCGTTTGG TCAAAGCATC TTATCAGGGA
AAGCTTCAAG AGGAGATCGA TTCTCTGGAA TCCTCCGGAG ATGAGCACAC CAGGCAGTAT
GTCCAGTATG CTCTGGGCAA GGGGGATCCG GATAGAGTCG TCTTTCAGGT TAAGTCCTGC
AATAAGAGGT GCTCAGAAGA GGACCATAGT TGCGAAGCCT CCTGCCTCTT CAATGCAGTA
GTCCGGGATA TGGAAGGGAA TGTGGTCATC CAAGATCGGA ACTGCACTCA CTGCGGAGAA
TGTATCGAGA CTTGCTCTTT AGACAGCTTA GTAGATAAAA AAGAATTCAT CCCTCTGGTG
GAAATTCTCC AGTCCAAGGA GATTCCCGTC TTTGCCATGG TAGCTCCGGC GATTATCGGA
CAATTTGGCG GTGATGTGAC CATGGGCCAG CTTCGAGCCG CACTGAAGCA TCTCGGTTTT
TATGGAATGA TTGAGGTAGC ACTTTTCGCC GATGTACTGA GCTTAAAGGA GGCCCTGGAA
TTTGACAAGC ATGTTCAAAC GGATAAGGAC TTTGTCCTCA CCAGCTGTTG CTGCCCCATC
TGGGTGGGGA TGGTAAAGAG GGTCTATGAT ACCCTGGTTC CCCATATCTC CCCCTCAGTA
TCTCCTATGG TAGCTTGTGG GAGGGGAATT AAACGCCTGC ACCCCGACGC CAAAACGGTC
TTTATCGGTC CATGTATTGC TAAAAAAGCT GAAGCTAAGG AACCGGATAT CCGGGATGCG
GTAGATGCAG TGCTAACTTT TCACGAACTC AAGCAAATCT TTGAAGCCAC GGATATTGAG
CCCTCGGAGA TGGAGGATAT ACCCAGTGAG CACTCTTCTA CCAGCGGTAG AATCTATGCC
CGCACCGGCG GAGTCTCCAA ATCCATCTCT GATACCTTAA ACCGTATCCG TCCAGATAAG
CCGGTAAAGA TCAAATCCAT TCAAGCTAAT GGCATTAAAG AGTGCAAGGC CCTCCTCAAT
GATATTATGA ATAACGAGAT TAAAGCCAAT TTCTACGAAG GCATGGGCTG CCCCGGAGGC
TGCGTAGGGG GCCCCAAGGC TATAGTGGAT GTAGATAGAG GTACTGAGTT CGTAAACAAA
TATGGTGCAG AAGCAGACGC CCTTACACCC GCAGATAATC AGCATGTATT GGAGCTGCTT
AAGCAGTTGG GCATTGATAG CGTGGAAGAG CTTCTGGGAG GAGAGTCTGC GGCAATTTTC
CAACGGGATT TTTAA
|
|---|
| Protein sequence | MSNLTYEEIF GRLVKASYQG KLQEEIDSLE SSGDEHTRQY VQYALGKGDP DRVVFQVKSC
NKRCSEEDHS CEASCLFNAV VRDMEGNVVI QDRNCTHCGE CIETCSLDSL VDKKEFIPLV
EILQSKEIPV FAMVAPAIIG QFGGDVTMGQ LRAALKHLGF YGMIEVALFA DVLSLKEALE
FDKHVQTDKD FVLTSCCCPI WVGMVKRVYD TLVPHISPSV SPMVACGRGI KRLHPDAKTV
FIGPCIAKKA EAKEPDIRDA VDAVLTFHEL KQIFEATDIE PSEMEDIPSE HSSTSGRIYA
RTGGVSKSIS DTLNRIRPDK PVKIKSIQAN GIKECKALLN DIMNNEIKAN FYEGMGCPGG
CVGGPKAIVD VDRGTEFVNK YGAEADALTP ADNQHVLELL KQLGIDSVEE LLGGESAAIF
QRDF
|
|---|
| |