Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0618 |
Symbol | |
ID | 7257585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 678399 |
End bp | 680348 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643560536 |
Product | TRAP transporter, 4TM/12TM fusion protein |
Protein accession | YP_002457120 |
Protein GI | 219666685 |
COG category | [R] General function prediction only |
COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAAGG ATGAAAAAGA CTTGGACTCT ATGGACGAGA AAGATCTGGA AGCTTTAGCG GAAGACGGTA AACGCAGACC ACTGACCGGC GGCGTGGCTT TGGTTGTGGG CGCCCTGGCC GTGATCTGGA CCCTCTACAC CATTTACTCA ACCATTTTCG GTGTTCTGAA TGTGCTGGTT TACCGTGGGA TTCACTTGAC CTTTGCCCTG GCACTGGGTT TCGTCTTGTT CCCCCCATCC AAAAAGCTGG CCGGCCATAA GATTGCTTAT GCAATCGACC TCCTGCTGGC CCTTACCAGT GTAGCCTTAG GTATCTATGT ACTGAACAGC GCCGGCAGTT TTGCGGACCG GATCGGCATT CCCAACCGGG CGGATTTTAT CTTTGGAGCC ATTGCCGTGG TGCTGATCCT GGAATTAACC AGACGGGTCG TCGGAAAATC CATGACCATC GTGGCCGGAG TGTTCCTGGT CTATGCATTA TTCGGCAGGC ACTTGCCATC CTTTCTCGCC CATCCCGGCG TCGATGTCAA GATGCTCACC AGCACCCTGC TCATTTCCTT AGAGGGCATT TTCGGCGTGG CTTTGGGCGT GTCCGCCAAT CTGCTCCTGA TCTTTATCGT CGTTGCCCAG TTTCTGGTGG GCACCGGAAC CGGCCAGTTT ATTATGGATC TCTCCAGCTC CCTGATTGGC TGGGCAAGGG GAGGGCCGGC CAAGATCGCC ATCATCAGCA GCGGCTTATT CGGCAGCATA TCCGGCAGTG CCGTGGCCAA TGTGCTCAGT ACCGGGGCGG TCACCATACC CATGATGAAG AAACTGGGCT ATAAGCCCCA TTTTGCCGGG GCGGTTGAAG CAGCGGCCTC GACGGGAGGA CAGATCATGC CCCCGGTCAT GGGCGCCGCC GCCTTTGTCA TGGCCGAAGT ATTGGGAGTA CCCTATGCCA AAGTATGTGT TTCCGCCGCT CTGCCCGCTA TTCTATATTA TGTGGCCTTA CTGATCATGG TGGATTTGGA AGCAGCCAGA ACCCAATTGC GCGGGATTCC CAAGGAAAAC CTGGTTCCTG TAAAAAAGAC CCTCAAGGAA GGCTGGTTCT ATATCATTCC CTTGGTTATT CTGATTTATC TAATCATGAC CGGCAGTTCT CCCCAAAGAG CGGGGGTCAT CACCATCGCT GCCAGCATCA TCATCAACCT TTTGAACTGG AAAAACCGCT TATCCCTGAA GCAGTATCTC CATATGCTAA AAGAAGGAAG CCTGGGTTGC ATATTGATCG CTATGGCCTG TGCTACAGCC GGGATCATTA TGGGCTGCGT CAATCTGACG GGGCTTGGGC CCAATTTCTC AGGCATCCTG GTATCTTTAG CTTCAGGCAA TCAACTGGCT TTGCTTCTCC TGACCATGGT GGCATCGATC ATCCTGGGTA TGGCACTGCC CACCTTGATC TGCTACATGA TTTTAGCCGT TCTCATCGCC CCGGCCCTGG TCAGCATGGG AGTAGAGCCC ATGGCCGCCC ATCTTTTCGT CCTGTATTTC GGAGTGATCA GCTTTGTCAC GCCCCCGGTG GCCCTGGCCG CCTATGCCGG TGCAGCCATT GCCAATGCCA ATGCCATGAA GACGGGCTGG ACCGCCGCTA AAATTGCCAC ATGCATGTTT GTGCTGCCCT TTATGTTCGT TTACAACCCA GAGCTCATCC TGATTCATGG TCTGAGTTGG AGCGTACTGC CCATCATCAT TACATCGGTG ATTGGCACCA CGGCCATTTG TATGGCAATC CAAGGTTATG CATTTACCCC AATCAGACAT TGGCCGGTGA GGGTGATCCT GTTTTTGGCG GGGATAAGCC TCATCTACCC GGGAATGTAT ACCGATCTGC TGGGAATAGC CTGTTTTGCC CTTATAGTCG GTGCAAACTA TCGGTTTAAG CAAAAAGACC GGGTTGTCTT AAGTGAATAG
|
Protein sequence | MTKDEKDLDS MDEKDLEALA EDGKRRPLTG GVALVVGALA VIWTLYTIYS TIFGVLNVLV YRGIHLTFAL ALGFVLFPPS KKLAGHKIAY AIDLLLALTS VALGIYVLNS AGSFADRIGI PNRADFIFGA IAVVLILELT RRVVGKSMTI VAGVFLVYAL FGRHLPSFLA HPGVDVKMLT STLLISLEGI FGVALGVSAN LLLIFIVVAQ FLVGTGTGQF IMDLSSSLIG WARGGPAKIA IISSGLFGSI SGSAVANVLS TGAVTIPMMK KLGYKPHFAG AVEAAASTGG QIMPPVMGAA AFVMAEVLGV PYAKVCVSAA LPAILYYVAL LIMVDLEAAR TQLRGIPKEN LVPVKKTLKE GWFYIIPLVI LIYLIMTGSS PQRAGVITIA ASIIINLLNW KNRLSLKQYL HMLKEGSLGC ILIAMACATA GIIMGCVNLT GLGPNFSGIL VSLASGNQLA LLLLTMVASI ILGMALPTLI CYMILAVLIA PALVSMGVEP MAAHLFVLYF GVISFVTPPV ALAAYAGAAI ANANAMKTGW TAAKIATCMF VLPFMFVYNP ELILIHGLSW SVLPIIITSV IGTTAICMAI QGYAFTPIRH WPVRVILFLA GISLIYPGMY TDLLGIACFA LIVGANYRFK QKDRVVLSE
|
| |