| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0585 |
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| Symbol | |
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| ID | 7257552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 645306 |
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| End bp | 647369 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643560503 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002457087 |
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| Protein GI | 219666652 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGTACT TTATCCAAAA TCCGAGCCTT CTATTAAGTT GTGATAATTT TCTTAAACAA
GAAAACAAGC TAAGCACTAA CCTATGGGAC GAAGTAAAAG ATTCTAAAAG AAAATTCATT
GAGGAAAACG TTGACCCCCG CTTAGACCCA ATCATTCCCA GGGAAGTAGC GGAATCATGG
ATCGTGGCCA AGAACCAACA CCTTGATCCC TACGTAAAAA GTTTTGAGGT ACTTTTAGAG
GCAAATAAAT TCGAAAAAGT TATAGCAAAA AAAGCGGATC TAGTAGAGAC AGCATCTAAT
TACATACACA ATTTTCATGA AATTCTAAAT TACTCAAATT TTATAATGGT TTTAACGGAC
GAGAATGGCG TAGTACTTCT TATAGAAGGC TCTAAAAAGG AGATCGAAGC TTTTAATAAG
TTAAATATAA GACTTTCTTC TTTATTAAAT GAAAAAATAA TCGGCACCTC AGCTCATACC
CTATGCATAC GTCATCGTAA ACCGATCCAA TTTATTGGTC CATATAATTA TAGTATGATT
TTACAAGATA ATATCAGTTC GGCGACTCCT ATATTCAACG ATCATGGAAG CGTAATCGGT
ACATTAGTCG TTGTCCAAAT GCTGGCCAGA AAAGATATGC AAAATATTCA AGCTCATTCA
CTTGGATGGG TTATGGCTAT GGGGTATGCG ATTGAAAATT TACTGGAACT TAAAAAACAA
AATAATTCTA TGACGCTAAT GAATGGAACA TTGGAAGCGA CATTATCACT TATTGATGAC
GGAGTCATAA CAGTCAATGA AAATTGCTAT ATTTCTCATA TCAATAAAGA AGGGATTAAT
ATTCTTGCTT CTAATCCTCA AGAGAAAATT ATAGGCAGGC ATCTTTCCGA ATTTGTGAAG
GATGATCAAC TTATCATAAT TAATGAATCC ATTCATAAGG GGAGATTCGT CCAGGAATAT
GAGACGATAT TTATGAACCG GGGACGTGAC ACTCAATATT TACTGAATAT TCGGCCGATT
GCGGATGGTC AAGGAAAATA TAACAGTGGT GCAGTAATTC GCTTATCGCG TTCAGATAAA
GTCAATCGTA TGGTTGCGAA CCGTGGCGGA ACTCCTGCGA GCTTTAAATT CGAAGATATT
AAGGGGAAAA GCACATCCTT AGCAAAGTCT ATTCAAATTG CCCAGAATGT CGCGAGAACA
GGCTATAATG TATTGCTTAT TGGGGAAAGT GGCACAGGAA AAGAACTTTT CGCCCAGTCA
ATACATAATT CGTATAAGGC AGACGGTCCT TTCGTTGCAG TGAATTGTGC CTCATTACCA
CGAAATCTAA TTGAAAGCGA ATTGTTTGGT TATGAAGGAG GAACCTTTAC AGGTGCAGAT
CGTAATGGAC GTCCCGGCAA AATTGAATTG GCTAACGGGG GGACCTTGTT TTTAGATGAA
ATTGGAGATA TGCCACTGGA AATCCAGCCC GTACTATTGC GTGTTCTTGA AGAAAAAAGA
GTGACAAGGC TTGGGGGAAG CAGAGGTATT CCGGTAGATT TCCGTGTGAT CGCTGCAACC
AATAAGAATC TTTCTCTAAT GGTGAAAGAA AAAACCTTCC GCGAAGATTT GTATTTTCGG
TTATCCATCT TTAAAATCAC TATCCCTCCC CTTCGCGAAA GAGATCATGA TGTAATCCTT
TTAGCGGAAT ATTTCATTGA GGACATCTCG AAAAAATTGA TGAGTGAGGT GCCCAAACTC
AGTCCGGCTT CTTACCAAAA GATTAAGGAA TACAGCTGGC CAGGAAATAT AAGACAACTT
CAAAATGCCA TGGTCTATGG TGTGAATATG TCGACAAATG GAGTTATAGA ACTCAGCAAT
TTGCCGGACG AAATGACGAG TAATGATTAT TTTAGGACCA AGGTTAACAC CAGGAAGCTA
ACCTTAGCAG AAATTGAGAA AGAAGTAATT TTTGAGGCTC TGTCACAAAC AGGAAATGAT
GCAAGCGAAG CTTCAAGAAT CTTAGGGATT GGGAGGACGA CTATTTACCG TAAACTTAAA
GAGTATGGGA TTGATATTAA ATAA
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| Protein sequence | MVYFIQNPSL LLSCDNFLKQ ENKLSTNLWD EVKDSKRKFI EENVDPRLDP IIPREVAESW
IVAKNQHLDP YVKSFEVLLE ANKFEKVIAK KADLVETASN YIHNFHEILN YSNFIMVLTD
ENGVVLLIEG SKKEIEAFNK LNIRLSSLLN EKIIGTSAHT LCIRHRKPIQ FIGPYNYSMI
LQDNISSATP IFNDHGSVIG TLVVVQMLAR KDMQNIQAHS LGWVMAMGYA IENLLELKKQ
NNSMTLMNGT LEATLSLIDD GVITVNENCY ISHINKEGIN ILASNPQEKI IGRHLSEFVK
DDQLIIINES IHKGRFVQEY ETIFMNRGRD TQYLLNIRPI ADGQGKYNSG AVIRLSRSDK
VNRMVANRGG TPASFKFEDI KGKSTSLAKS IQIAQNVART GYNVLLIGES GTGKELFAQS
IHNSYKADGP FVAVNCASLP RNLIESELFG YEGGTFTGAD RNGRPGKIEL ANGGTLFLDE
IGDMPLEIQP VLLRVLEEKR VTRLGGSRGI PVDFRVIAAT NKNLSLMVKE KTFREDLYFR
LSIFKITIPP LRERDHDVIL LAEYFIEDIS KKLMSEVPKL SPASYQKIKE YSWPGNIRQL
QNAMVYGVNM STNGVIELSN LPDEMTSNDY FRTKVNTRKL TLAEIEKEVI FEALSQTGND
ASEASRILGI GRTTIYRKLK EYGIDIK
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