Gene Dhaf_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0556 
Symbol 
ID7257523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp616172 
End bp616810 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content52% 
IMG OID643560475 
ProductFormiminotransferase-cyclodeaminase 
Protein accessionYP_002457059 
Protein GI219666624 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3404] Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAGT CAAGCGCTAA AGACTTTGTA GCGGCCCTTT CATCAAAAGA ACCTATACCG 
GGAGGCGGCG GAGCCTCGGC CTATGTGGGT TCTATGGGCA TGGCACTGGG TGTAATGGTC 
GGGAATCTGA CCGTGGGTAA GAAAAAATAC GCTGATGTTG AAGCAGAGGT TAAGATTTTA 
ATAGAAAAAA GCGAAAAAGT CATCGCCAGA TTCCAGTCTC TGGTGGCGGA AGATGCCGCA 
GCCTTTTATC CCCTATCTCA GGCTTATGGC ATGCCTAAAA ACACCGAAGA GGAAATTCAG 
CGCAAAGAGG AAACACTGCA GAAAGCCCTG GTCAATGCCA CCCTGGTTCC TCTGGAGATC 
GCCCGCTGCT GTGCGGAGGG GATCGACCTG CAGGAGGAAT TCGCCCAGAA AGGCACCCGG 
ATCGCCATCA GTGATGTGGG CGTGGGTGTG GCCTTCCTGA AGGCGGCCTT GGAAGGGGCC 
AAACTCAATG TTCTGATCAA TACCCAGATC ATGAAGGATC AGGAGTTCAA GCACAGAATC 
GAGACCGAAC TGGCCGATCT CTGTACAGTC TATACAGCCA AGGCCGACCG GATTTTTGCT 
GAAGTTCAGA ATTCCATTAC GGGAGGTAAA TCATCGTGA
 
Protein sequence
MLESSAKDFV AALSSKEPIP GGGGASAYVG SMGMALGVMV GNLTVGKKKY ADVEAEVKIL 
IEKSEKVIAR FQSLVAEDAA AFYPLSQAYG MPKNTEEEIQ RKEETLQKAL VNATLVPLEI 
ARCCAEGIDL QEEFAQKGTR IAISDVGVGV AFLKAALEGA KLNVLINTQI MKDQEFKHRI 
ETELADLCTV YTAKADRIFA EVQNSITGGK SS