Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0493 |
Symbol | |
ID | 7257460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 539758 |
End bp | 542826 |
Gene Length | 3069 bp |
Protein Length | 1022 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643560412 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_002456996 |
Protein GI | 219666561 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000359244 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGGATA GATTGAGAAG ATATTTTAAG ATAAAACAGC TTATCGCTGT GATAATCCTA TTAAGCACAA TGTTGCTGAT GCTATCCACT ATTTACTATA CCGATGCTCC CGAACAAGAA TCTCCTGCTG CTGTACAGGG GACTCTGGAT CTGTCTTCCT GGGACTTCAC AAAGGATAGG AGTGTCTTCC TAAATGGAGA ATGGGATTTT TACCCGGGAA AACTTCTGCA GCCTGAAGAG CTTCCCAAGG AAACTCATTA TTTCATGAAA GTTCCCGGGG GCTGGGATAA AACAAAGGGG GCTTTCCTTC AGAAATCAAG GGGAAACGGC ACCTACAGGC TCTCTGTAAA GCTGCCGGAA TTGCAGGAGC AGCTGGGGTT AAAAATTCAT AATATATGGA TGGCCCACAG GCTTTTTATC AACGGTCAAT TGGTCAAAGA ATCCGGACTG CCCTCAGACA GTCTTGAGGG CTATCAGGCC CTTAATACGC CATACGTTGT TGTAGTAGAG CCGGCTGAGG AGCTGGAGAT CGTTATTCAG GTATCGAATC AAGTCCATTT TACGGGAGGA ATTGCCCACC CCATTCAGCT GGGGCTCAAG AATTACATAG AGAAGAAAAA TATGCTGGCC TTTGGAGGAG ATATGGCAGT TTTTCTGCTG TTTCTTATGT TTGGAATTTA TCACCTTCAT ATGTACAACA TGAGGGACAA AGAAAAAACC TACCTGTTCA GCGGACTGTT TTTGCTAAGC ATCTCTATAG TCTCAATTAC TTTTGGGGAA AAAGTTTTAA TGCAGGTTTT TGAGGAGATC CCCTTTGCCG TGGCTTATAA ATTACAGGAT TTTTTTCTTT TTGCCAGCTT TGCAGCGCTG ACTTTATTTA TTCAGTCCCT GGAGCCGGGA ACTATCAAGG GGAGGAATTT AATTCTATCC CTGATGCCCG TGCTGATTTA TCTGGGAGTG GTTATCTTGA TACCCTACCA CTGGTATTCG CCCGTCAAAT TATATATTAC TTTTTACGCT AATTTACTGC TGTTTTTTTA TATTATAAGA CTTATCTATA TGCTTTTTTA TAAAAAACAG GGAAAATTGC CCCTTAATGA GTCGGTTTAT ATTTTCCTGT GCTGTATATT TGCCGGAGTC ATCATTATTG ATTACAACTT ATATTATTCA GGATATACCA ATGGAAATAT GATTGCGAGA TTAGGGATAT TCGCCTTTTT GCTCAGCCTC AATCTCTTTT TGTCCAGGCG GTTCACCAAC AAAATGAATG AAGTACAAGC CCTTTCCGAG GAATTGATAA GGTCCAGGGA AATAAAGGAT GAGTTTCTGG CCAGAACATC CCATGAGCTG AAAACTCCCC TCCACGGTAT TATCAATATC TCCGGCCACC TTTTGAAGGG AGAGACATCT TCCTTAAGCC TGGAGCAAAG GGAAAACCTT TTGTTGCTCC AGGATACTTC CTCCAGGCTT TCGCTGCTGG TTAATGATTT AGTTGACATA ATAAAGCTTC GCCATGAGGA CTTGCAGCTG AATCTTATCA CGGTTGATTT ATATGTGGTG ATTCAACTGG TATTTCAACT GTTGTCCTTT GATTTGCAGG GCAAGGAAGT GAAGATGCTG AATAAAGTAA AACCTATGAC CTTCGTAGAG GCTGATGAAA ATCGCCTGAG GCAAATTTTA TATAATATTA CCTCCAACGC CATGAAGCAT ACGGAAAAAG GAGAAATTGT TGCCCAGGCA AGGGAGGAGG GCTTGGACAT AGTCCTGACC ATTTCCGATA CGGGAAAGGG AATTCCGCAG GAACATTGGG AGCTGGTCTT TAAGGACTTC AATCATGATT CGCTGCCGCA GCAGGACTAT AAACAGGGTA TGGGTTTGGG GTTATATATC AGCAGGCAGC TGGCCAGAAA AATGAAGGGG GAGGTATGGA TTGCCGATTC TGTTGTCAAT AAAGGGACAA GTATGGCGGT ACGACTTGCC AAGGGGCAGT GTTTAAACAC CGAAATGACT GCCGGATCGG TATTGGAAAG AAAAGTTTGG AGTTCAAAAC CAACAAGTTC CGGCTTAAGT GAGAAAATGA AAAAGATATT GATTGTCGAT GATGAACCCA CCAATATTAG AGTTTTATCC CTTATGTTGG AGGGAGAGTA TCAGGTGTCT GCAGCCTATA GTGGGGAGAA AGCCCTGGAA TCACTTAAAA ACGAAAAATT CCATCTTCTT TTGACCGATC TGATGATGCC CGGCATGTCA GGTATCGAAC TGACCCAACA AATAAGACAA AATTACTCTC TGATCGAACT GCCTATTATC ATTGCCACAG CCAGGAACAG AGAGAGGGAA ATAGAATTGG CTTATCAAAA CGGCGCTAAT GATTATATTA CCAAACCCTT TACGGCAGAA GAGGTTCAAT GGAGGGTAAG GAGCCTGCTG AAGCTGACGG ATACCATGGA GAAGGCTTTT GAAAGTGAGA TGGCTTATTT GCAGGCCCAA ATCAAGCCCC ATTTCATCTA TAATGCTTTA AGCAATATCA TTGCCCTCTG TCATGAGGAT GGGGAGAAGG CTTCAGAGAT GTTATCCCTC CTGAGCAGAT ATTTAAGACA TATTTTTCAG CGGGATCAGA ACCAGCAGAC TTTACAACTG CAGCAGGAGC TGGACCTTAT CAAAACCTAT GTGGAAATTG AACAGCTGCG GTTTGGAAAG CATCTTCACT ATGAAACCTA TGTTGATCCG GAAATCCTCA ATAAGGGGAT AAAGATTCCG ACGCTGCTTA TTCAGCCTTT GGTTGAAAAC GCCATACGGC ACGGGCTTTT TAATAAAGAA GGAGAGGGAA CGGTGTCTCT GAGGATTACG GAGGGGGAAG GATTTATTCA CATTATCGTA GAAGACAACG GCGTAGGTAT GAGTGAGGAT GAGGTAGGGA GGATCCTGAA CGGAAAAGGG GGAAAGGGTG TAGGCCTCAA GAATGTTTTG ATGAGGGTAG CCTCCTTGCC CAAAGCTGCT TTTTTAATCG ACTCTGAATT GGAAAAGGGA ACCCGGTGCA GTATTTTTTT GCCCAAAGAG CTGGTTTAA
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Protein sequence | MLDRLRRYFK IKQLIAVIIL LSTMLLMLST IYYTDAPEQE SPAAVQGTLD LSSWDFTKDR SVFLNGEWDF YPGKLLQPEE LPKETHYFMK VPGGWDKTKG AFLQKSRGNG TYRLSVKLPE LQEQLGLKIH NIWMAHRLFI NGQLVKESGL PSDSLEGYQA LNTPYVVVVE PAEELEIVIQ VSNQVHFTGG IAHPIQLGLK NYIEKKNMLA FGGDMAVFLL FLMFGIYHLH MYNMRDKEKT YLFSGLFLLS ISIVSITFGE KVLMQVFEEI PFAVAYKLQD FFLFASFAAL TLFIQSLEPG TIKGRNLILS LMPVLIYLGV VILIPYHWYS PVKLYITFYA NLLLFFYIIR LIYMLFYKKQ GKLPLNESVY IFLCCIFAGV IIIDYNLYYS GYTNGNMIAR LGIFAFLLSL NLFLSRRFTN KMNEVQALSE ELIRSREIKD EFLARTSHEL KTPLHGIINI SGHLLKGETS SLSLEQRENL LLLQDTSSRL SLLVNDLVDI IKLRHEDLQL NLITVDLYVV IQLVFQLLSF DLQGKEVKML NKVKPMTFVE ADENRLRQIL YNITSNAMKH TEKGEIVAQA REEGLDIVLT ISDTGKGIPQ EHWELVFKDF NHDSLPQQDY KQGMGLGLYI SRQLARKMKG EVWIADSVVN KGTSMAVRLA KGQCLNTEMT AGSVLERKVW SSKPTSSGLS EKMKKILIVD DEPTNIRVLS LMLEGEYQVS AAYSGEKALE SLKNEKFHLL LTDLMMPGMS GIELTQQIRQ NYSLIELPII IATARNRERE IELAYQNGAN DYITKPFTAE EVQWRVRSLL KLTDTMEKAF ESEMAYLQAQ IKPHFIYNAL SNIIALCHED GEKASEMLSL LSRYLRHIFQ RDQNQQTLQL QQELDLIKTY VEIEQLRFGK HLHYETYVDP EILNKGIKIP TLLIQPLVEN AIRHGLFNKE GEGTVSLRIT EGEGFIHIIV EDNGVGMSED EVGRILNGKG GKGVGLKNVL MRVASLPKAA FLIDSELEKG TRCSIFLPKE LV
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