| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0489 |
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| Symbol | |
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| ID | 7257456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 530260 |
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| End bp | 534618 |
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| Gene Length | 4359 bp |
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| Protein Length | 1452 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643560408 |
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| Product | cell wall/surface repeat protein |
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| Protein accession | YP_002456992 |
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| Protein GI | 219666557 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2247] Putative cell wall-binding domain |
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| TIGRFAM ID | [TIGR02543] Listeria/Bacterioides repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0529115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATACAA ACTTAATAAA AAAGACAATG ACAATTCTGT TAACCTTATG CCTGGTACTG
GGTATGATCC CGGGACACGG TGTCTATGTA TTGGCTGCAA CAAATGTGCC AACGGGCAAT
TACACTATTT CAAGCAATGG CGACTATCAA TTGGATGCAG GATATTCCGG TAAAATCACC
ATTGCTGAGA CAGCAACTGC TGTAAGAATT ATCGGAAATG GTGCTCACAC TGATACAAGT
ATTGGTGTGG AAGGTGGGAG AAGCTCAGCA CTGGAATTAA CCATTGAAGA CCTCAACATA
ACGGCTCCAG TATCGGGAGG TAATAGTGGT GAGCATGGTA TCGATTTTTC TAACACCGGT
AATTATGGAC ATAAGCTTTG GCTCAAAGGG AATTGCTCGA TTATGGGGGA TCAAGCAGGT
ATTGCTGTAA ATGATGGAGT GCAGCTGACA ATAGACAAGG CAGCCGATGT TGCAAACGAT
GCTGATGCAG TACTTACTGT ACTTGGTAAA AATGGTTCTG CAGCTATTGG CGGCTATTAT
AAAAATAATC ACACTGATTA CGGTAGCTGC GGTGAAATAA CGATCAATGG TGGAACCATA
AATGCCACAG GAGCAGCGGC TTACCCAAAT TTTGTTTACG GAGCAGCAGG TATCGGTGGA
AGTCTTATTT CTGTTCAAGG CTTTACAAAA GGCGGAACCA TAACAATTAA TGGAGGTATT
ATAACGGCAA CTGGAGGAGA AGCAGCGGCA GGTATCGGAG GCGGTATGGG CTTTAATTAT
AATGGAGCCA GCCAAGGAAT AATAACTATT AATGGCGGAA CTGTTGTCGC TTCAGGAAAT
AAAACTGGAG CAGGTATTGG TGGTGGTAAC ACGGGGGGAG GTTACATCAT AAATATCAAT
GGTGGGACTA TTACGGCCAA TGGAAGTGCT GATATGGCGG AAGGTGCCGG TGCAGGCATA
GGAAGCTCTT CATTTGGATT TGGCTCTCCC ACGATTGTAA ATATATCTGG TGGTACGATA
ACAGCAACGG GAGGAACTAA CAGCAACTTT GGAGGGTCGG GTATTGGCAG TGGTTATTTA
TCTGAACAAG GAACAATAAA TATTACCGGG GGTTCGATAA CGGCCATTGG TGGAAGTAAT
GGAGGCGCAG GTATTGGCGG AACATCGGGT AATAATGGTG AAAAAGTTAC CATTTCAGGC
AACCCGCTCG TTAAAGCCTT TGCTGGAACC GGAGCTGAGG ATATTGGTAA AGGTAAAGGT
ATGGGTGGAA GCAGTGGAAC CTTAAAAAAT GGAACGGATG ACTGGGTCTA TCTGAAATTT
AATGTAACCA AAGAAGGAAG CAATGTAGCC GGAGCAACGA TTAATATAAA TTCAAGCCAG
TACACAACGG ATGCCGGTGG GTATGCCTAT TGCTTTGCGC CGAAAAGTAA TACGGCATAT
ACCATAGATG CAGCAGGGTG TCAACAAGCA TCGGGGACAG CAAGCAATGC TAAGATCAGC
AATTTAGTCA ATGTTACAAT GACTGCGGCG GTGACCTACA CCGTAACCTT CGAGAGCAAC
GGAGGAAGCG CGGTCGCCGC GATCCCTAAT GTGGTAGAGA ATAGCACCGT AGCCTTGCCG
GCACCGCCGC CGACCAAAGC AGGATACAGC TTTGCCGGGT GGTACATCGA TAATGACATC
TTTGCCGATG AATTCACGGC GGACACTCCC GTGACAGGCA ATCTTACAGT CTATGCCAAA
TGGACGCCCC TGCCTCCGGC AAGTTACACC GTAAGCTTCG AGAGCAACGG AGGAAGCGCG
GTCGCCGAGA TCCCCAATGT GGTAGAGAAT AGCACCGTAG CCTTACCGGA ACCGCCGACC
AAAGCAGGAT ACAGCTTTGC CGGGTGGTAC ACCGATAATG ACACCTTTGC CGATGAATTC
ACGGCAGGCA CTTTCGTGAC AAGCAATCTC ACAGTCTATG CCAAATGGAC GCCCCTGCCT
CCGGCAACTT ACACCGTAAG CTTCGAGAGC AACGGAGGAA GCGCGGTCGC CGCGATCCCC
AATGTGGTGG AAAATAGTAC CGTAGCCTTA CCGACACCGC CGCCGACCAA AACAGGATAC
AGCTTTGCCG GGTGGTACAT CGATAATGAT ACCTTTGCCA ACGAATTCAC GGCAGGCACT
TTCGTGACAA GCAATCTCAC AGTCTATGCC AAATGGACGC CCCTGCCTCC GGCAACCTAT
ACCGTAAGCT TCGAGAGCAA CGGAGGAAGC GCGGTCGCCG CGATACCTAA TGTGGTAGAG
AATAGCACCG TAGCCTTACC GACACCGCCG CCGACCAAAG CAGGATATAG CTTTGCCGGG
TGGTACACCG ATAATGACAC CTTTGCCGAC GAATTCACGG CAGGCACTTT CGTGACAAGC
AATCTCACAG TCTATGCCAA ATGGACGCCC CTGCCTCCGG CAACTTACAC CGTAACGTTT
GAGAGCAATG GGGGAAGCGC GGTCGCCGCG ATCCCCAATG TGGTAGAGAA TAGCACCGTA
GCCTTGCCGG TACAGCCGAC CAAAGCAGGA TACAGTTTTG CCGGATGGTA CACCGATAAT
GGGACCTTTG CCGATGAATT CACGGCAATT ACCCCTGTGA CAGGCAATCT CACAGTCTAT
GCCAAATGGG CAACCCTTCC TACGGATGAT TCATCGGATA GAGACGACTC CACGTCTCCC
TCCACACCAA CACCCCCGTC GACACCCCCA GCTACCGTCA CAGGCAATGT TAAAGACGGA
GCCACTGGCG GCACCGTGTC CAACGTTACC GCCACCGTAG CCAAGGACAG CCATAACCAG
ATAACCCTTA CCCTGCCCGC GGCCCAGATT GCCGTCACCA AGCAGCCGGA CGGTACAATC
ACACCGTTGC TCGATCTAGC TAAGGTAGTG ATTACCAAGG ATACAGGAAC CCAGCTTTCC
ATCTCAGCAA ACGGAACGTT CCAAATCGTG AACCTGGCCC AAGGTACGGA CCACACCTTT
AAGATCGGCT ATGATTTAGG AAATGGCCAA AAAATTACCA TCGGCACGAT GGACATCACG
GTCGATCCCA GCGGCAGCGT CAAACTCGAT GTCACCTTAA TCGACCCCTA CGGCATCATT
ACGGATGGAA GAACAGGGAA AACCCTTGCC GGGGCCAAAG TAATCCTTTA TTATGCCGAT
ACCGCCCGGA ATAAAGCCGC CGGCAAAACC CCGGGCACCC TCATCGAACT TCCCCGACTC
GAAGAGTTCA AGCCCAACCA GAATATAAAC CCTCAAAACA GCGACCCCAG CGGAGCCTAT
GGCTTCATGG TCTTCCCGGA AAGCGATTAT TACCTCGTGG CGAACAAAGA AGGGTATGAG
GAGTATAAAA GCCCCACCAT CTCCGTCGAA CAAGACCTCG TCAAATGGGA TTTCAAAATG
AATCAGCCCC TCCTCGGCAT AAAACGGCTG GCCGGCCCAA CCCGAGTCGA CACCGCATTG
GAAATCGCCA AAGCAACCTT CACTGCAAAA GTAAAGCATG TCATCCTAGC TACCGCTGCC
AATTATCCTG ATGCCTTAGC CGGAAGTGTG CTGGCCTACA AGCTCAATGC CCCCATCCTG
CTTATCGACA GCTCCGGCGA AGAACAAGAA AAAGTTCTGG AGTATATAAG CATGAACTTA
GACAGTGCAG GAACTGTCCA TATTTTAGGC GGCAAAGGAA TCGTCGGCAG TGAGATCGAA
GAAAAAATAA AAGCGCGGGG CTTCGCAAAG ATCACCCGGA TTGGCGGAAA GGACCGCTAT
GAAACGGCCC TAAAGATCGC AGAATACTTA GAAGTACCCC AGGGGACCCC GGTCGTGCTA
GTCTATGGGG AAGACTATCC TGATGCCTTA TCCATAAGCA GCAGCGCAGC CGCAATGCAA
AGCCCCATTC TCTTAGTAGG GCGAAATGAA ATCCGGCCGG AAATAAGCCA AGCCCTACAA
AAAATAAAGC CGATTAAAGT CTACATCTTA GGGCGCGAAG GAAAGATCAG CTCCGCAGTA
GAAAAACAGG TTGCCGAGGC AGCAGGCTTA GGAGCTGATA AAATAGTGCG GATTGGTGGA
ACAGATCGTT ATGAAACCGC ATTGAAAATA GCCCAATACT TCAATTTGTC GGGACAAAAT
GTCAGTATAG CCACAGGAAA GAACTTTCCG GATGCCTTAG CCGGAAGCAT CTATGCCGCA
AACCACAACT CCCCGCTCCT CCTCTGCGAT GAAGAACTGT CGGAAGAAGC AGCAGCATAC
TTAAGGACAA GGGCTATAAC GGGAGGAACC CTTTTCGGGG GAGAAGGAGC CGTCAGTAAA
GCAGTTGAAG AAATGCTGAA GCAGATCATC GGGAAATAA
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| Protein sequence | MYTNLIKKTM TILLTLCLVL GMIPGHGVYV LAATNVPTGN YTISSNGDYQ LDAGYSGKIT
IAETATAVRI IGNGAHTDTS IGVEGGRSSA LELTIEDLNI TAPVSGGNSG EHGIDFSNTG
NYGHKLWLKG NCSIMGDQAG IAVNDGVQLT IDKAADVAND ADAVLTVLGK NGSAAIGGYY
KNNHTDYGSC GEITINGGTI NATGAAAYPN FVYGAAGIGG SLISVQGFTK GGTITINGGI
ITATGGEAAA GIGGGMGFNY NGASQGIITI NGGTVVASGN KTGAGIGGGN TGGGYIININ
GGTITANGSA DMAEGAGAGI GSSSFGFGSP TIVNISGGTI TATGGTNSNF GGSGIGSGYL
SEQGTINITG GSITAIGGSN GGAGIGGTSG NNGEKVTISG NPLVKAFAGT GAEDIGKGKG
MGGSSGTLKN GTDDWVYLKF NVTKEGSNVA GATININSSQ YTTDAGGYAY CFAPKSNTAY
TIDAAGCQQA SGTASNAKIS NLVNVTMTAA VTYTVTFESN GGSAVAAIPN VVENSTVALP
APPPTKAGYS FAGWYIDNDI FADEFTADTP VTGNLTVYAK WTPLPPASYT VSFESNGGSA
VAEIPNVVEN STVALPEPPT KAGYSFAGWY TDNDTFADEF TAGTFVTSNL TVYAKWTPLP
PATYTVSFES NGGSAVAAIP NVVENSTVAL PTPPPTKTGY SFAGWYIDND TFANEFTAGT
FVTSNLTVYA KWTPLPPATY TVSFESNGGS AVAAIPNVVE NSTVALPTPP PTKAGYSFAG
WYTDNDTFAD EFTAGTFVTS NLTVYAKWTP LPPATYTVTF ESNGGSAVAA IPNVVENSTV
ALPVQPTKAG YSFAGWYTDN GTFADEFTAI TPVTGNLTVY AKWATLPTDD SSDRDDSTSP
STPTPPSTPP ATVTGNVKDG ATGGTVSNVT ATVAKDSHNQ ITLTLPAAQI AVTKQPDGTI
TPLLDLAKVV ITKDTGTQLS ISANGTFQIV NLAQGTDHTF KIGYDLGNGQ KITIGTMDIT
VDPSGSVKLD VTLIDPYGII TDGRTGKTLA GAKVILYYAD TARNKAAGKT PGTLIELPRL
EEFKPNQNIN PQNSDPSGAY GFMVFPESDY YLVANKEGYE EYKSPTISVE QDLVKWDFKM
NQPLLGIKRL AGPTRVDTAL EIAKATFTAK VKHVILATAA NYPDALAGSV LAYKLNAPIL
LIDSSGEEQE KVLEYISMNL DSAGTVHILG GKGIVGSEIE EKIKARGFAK ITRIGGKDRY
ETALKIAEYL EVPQGTPVVL VYGEDYPDAL SISSSAAAMQ SPILLVGRNE IRPEISQALQ
KIKPIKVYIL GREGKISSAV EKQVAEAAGL GADKIVRIGG TDRYETALKI AQYFNLSGQN
VSIATGKNFP DALAGSIYAA NHNSPLLLCD EELSEEAAAY LRTRAITGGT LFGGEGAVSK
AVEEMLKQII GK
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