Gene Dhaf_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0423 
SymbolrplD 
ID7257390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp470325 
End bp470948 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content50% 
IMG OID643560342 
Product50S ribosomal protein L4 
Protein accessionYP_002456926 
Protein GI219666491 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000203712 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAGG TTCAAGTAGT TAATATGCAA GGTTCTCCCG TTGGAGAGCT GGAGCTGGAT 
GAATATGTGT TCGGTATTGA ACCCAATACC CATGTTATGC ACCAGGCAGT AGTAGGACAA 
CTGGCCAGCC AAAGACGTGG TACTCACTCC ACCTTACTCC GTGGAGAAGT TCGCGGAGGC 
GGCCGCAAGC CCTGGCGTCA AAAAGGTACC GGCCGGGCTC GCGCAGGCAG CATTCGTTCA 
CCTCTATGGA GAGGCGGCGC TGTGCTTTTC GGACCCAAGC CCCGCAAATA TGGCTTCAGC 
CTTCCTAAGA AGGTTCGCCG CCTGGCTTTG CGTTCAGCCC TTTCTTCCAA GGTAAACGAA 
CAAAAACTGA TCGTATTGGA AGATTTGAGC TTGAACGAAG CAAAAACCCG GGAAATGGTT 
AAAGTTCTGC AGGCCCTGAA TGTCGGCAAA AAAGCTTTAA TCGTTACAGA TGAATTTATG 
GAAACCATCG ATCGTTCTGC CCGCAATATT GCTGGGATCA AAACCACTGC AGTAGAAGGC 
ATGAATATTT ACGATCTTCT CAATTCTGAT GTCATCGTCA TGACCAAAGC AGCGGTAACG 
AAAACGGAGG AGGTGTTAGC GTAA
 
Protein sequence
MPKVQVVNMQ GSPVGELELD EYVFGIEPNT HVMHQAVVGQ LASQRRGTHS TLLRGEVRGG 
GRKPWRQKGT GRARAGSIRS PLWRGGAVLF GPKPRKYGFS LPKKVRRLAL RSALSSKVNE 
QKLIVLEDLS LNEAKTREMV KVLQALNVGK KALIVTDEFM ETIDRSARNI AGIKTTAVEG 
MNIYDLLNSD VIVMTKAAVT KTEEVLA