Gene Dhaf_0405 details

Gene Information

• Locus tag: Dhaf_0405
• ID: 7257372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 445854
• End bp: 446381
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643560324
• Product: NusG antitermination factor
• Protein accession: YP_002456908
• Protein GI: 219666473
• COG category: [K] Transcription
• COG ID: [COG0250] Transcription antiterminator
• TIGRFAM ID: [TIGR00922] transcription termination/antitermination factor NusG

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000000000272103
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTAAGA ACTGGTATGT TATTCACACT TATTCCGGCT ATGAGAATAA GGTGAAGACC 
AATCTTGAAA AGCGCGTAGA ATCCATGAAC ATGGAGGATA AAATCTTTCG TGTTCTTGTT 
CCCATGGAAG ATGAGATTGA AATCAAAAAT GGGAAGAAGA AGATCGCCAA GCGTAAAGTT 
TTCCCGGGCT ATGTTCTGGT GGAAATGGAT ATGACGGACG ATTCATGGTA TGTGGTGCGC 
AATACTCCGG GTGTGACAGG CTTTGTCGGC ACCGGGGCCA AGCCCATTCC CTTGCTGGAT 
CATGAAGTAC AAGCTATTCT AAAGCAAATG GGTGTGGAAG AAGTCCGTAC ACGTGTGGAT 
TATACCGTGG GTCAAAACGT ACGTGTAATA TCAGGTCCTT TTAAGGATTT CATCGCTTCT 
GTTCGGGAAA TCCTTGAAGA TAAAGGGAAG CTGCGGGTAT CTGTGTCCAT GTTTGGACGG 
GAGACTCCGG TGGAACTTGA TTTTGCTCAG GTCGAGAAAG TCGACTAG 

 

Protein sequence

MTKNWYVIHT YSGYENKVKT NLEKRVESMN MEDKIFRVLV PMEDEIEIKN GKKKIAKRKV 
FPGYVLVEMD MTDDSWYVVR NTPGVTGFVG TGAKPIPLLD HEVQAILKQM GVEEVRTRVD 
YTVGQNVRVI SGPFKDFIAS VREILEDKGK LRVSVSMFGR ETPVELDFAQ VEKVD