| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0402 |
|---|
| Symbol | |
|---|
| ID | 7257367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 444130 |
|---|
| End bp | 444783 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643560319 |
|---|
| Product | RNA polymerase factor sigma-70 |
|---|
| Protein accession | YP_002456905 |
|---|
| Protein GI | 219666470 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 3.38021e-16 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACACTTA ACGCCCAACT TGAAGCGTTG GAAGAGTGCG ACACGAATGA AGTCATAGTG
GATGAAGAAG TGGTAGAGCT GGCCAAAAAC GGTGATGCCG AAGCACAGGA ATACTTAATT
AATAAGTACA AGAACTTTGT CAGAGCAAAA GCAAGATCAT ACTTCCTGAT CGGAGCAGAT
CGTGAAGATA TTATCCAAGA GGGTATGATT GGACTCTACA AAGCGATTCG AGATTTCCGT
GGTGATAAGC TCTCCTCGTT CCGAGCCTTT GCTGAGCTGT GTATTACAAG GCAGATTATT
ACCGCCATTA AGACGGCTAC CCGGCAAAAG CATATTCCTT TGAATTCCTA CGTGTCCTTA
AATAAACCTA TCTATGACGA AGATTCGGAT AGAACCTTAT TGGATGTGAT TTCCGGCACC
AGAATAACCG ACCCGGAGGA ATTGATCATC AGTCAGGAAG AGTTCGACGA TATCGAAGAA
AAGATGGGTG AGATCTTGAG TTCCTTGGAG TGGAAAGTCC TGATGGCTTA CCTTGAAGGA
AAATCCTATC AAGAGATTGC TGTAGACCTA CATAGACATG TGAAATCCAT TGATAATGCT
CTCCAAAGAG TAAAAAGGAA GCTTGAGCGT TACTTAGAAC GTCGTGATGG ATAA
|
|---|
| Protein sequence | MTLNAQLEAL EECDTNEVIV DEEVVELAKN GDAEAQEYLI NKYKNFVRAK ARSYFLIGAD
REDIIQEGMI GLYKAIRDFR GDKLSSFRAF AELCITRQII TAIKTATRQK HIPLNSYVSL
NKPIYDEDSD RTLLDVISGT RITDPEELII SQEEFDDIEE KMGEILSSLE WKVLMAYLEG
KSYQEIAVDL HRHVKSIDNA LQRVKRKLER YLERRDG
|
|---|
| |