Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0393 |
Symbol | |
ID | 7257358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 435359 |
End bp | 436525 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643560310 |
Product | PilT protein domain protein |
Protein accession | YP_002456896 |
Protein GI | 219666461 |
COG category | [R] General function prediction only |
COG ID | [COG4956] Integral membrane protein (PIN domain superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000182305 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGCA ACATTGTGCG CGTTATCATC ACGGTTTTAG CAGGTGCCAT AGGTTTTTAC CTTAATGTTG TTCTTATGAG ACTTGATGTG CTCCAGTCTC TGGGATGGCA GATTTCTCCC ATTTGGGCTT TTGTGGCGAT GGTAGCAATT TTTGCTATTC TCGGCTTCCT GATTGCTCCG GCGAGCATGC GAGGTTTTTT GAAGATGATT TCCTGGTTCG ATGCCCGCAT GACTAAAGTG CCTACACACG ATTTGATTGG TGGAGCAGTT GGTGTTATTA TCGGACTTAT AATTGCTAGT TTATTAAGCA GTGCCTTGAG GGGCATCCCC ATTATCGGCT CTGTAATATC CATTATTTTA AGCGTTTCCC TTGGTTATTT AGGTTTGATC ATTGGGGTAA AACGCAAAGA AGAGGTTTTG GGCTTCTTCA CCTTTCTTCC GAAATTTAAA GGGGATAAAG GAGAGAAAGG CAAGGGCAAG GATGGCAATA GACAAAGTCT TGGCGCAGCT CTGCCCAATT ATAAAATTTT GGATACCAGT GTGATTATCG ATGGGCGTAT TGCGGACATC GTTCAGACCG GCTTTCTTGA AGGCACACTT CTGATCCCGG GCTTTGTTCT GGAAGAGCTT CAGCATATCG CGGACTCCTC CGATCTGCTG AAGCGCAACC GCGGTCGTCG GGGCCTGGAT ATCTTAAACC AAATCTCCAA GGAAGAGTTG GCAAACAATG TGGAGATCAT GGAGATAGAT TTCGAAGATA TTTCTGAAGT GGACAGCAAA TTGGTCCGCT TAGGGCAGAA TCTTGGCGCT CCTATCCTCA CCAACGACTA TAACCTTAAT AAGGTAGCGG AACTGCAAGG GGTCAAGGTC CTCAATATCA ATGAGCTGGC CAACGCAGTG AAGCCTATTG TCCTTCCCGG AGAAGAAATG GAAGTTCAGG TGATGAAAGA GGGCAAGGAG CCGGGACAAG GGGTAGCCTA TCTGGATGAC GGCACCATGA TCGTTGTGGA TACCGGCCGG CGTTATATGG GGCAAACCAT CACCGTGTTG GTAACAAGTG TACTGCAGAC TGCCGCGGGA CGGATGATTT TTGCCAAACC CAAAGCTCTT GTTGAAAAAA AGTCGATTGG CCTGTCGGGG ACGAATGAGG TGAATGCGCT TGGTTAA
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Protein sequence | MIRNIVRVII TVLAGAIGFY LNVVLMRLDV LQSLGWQISP IWAFVAMVAI FAILGFLIAP ASMRGFLKMI SWFDARMTKV PTHDLIGGAV GVIIGLIIAS LLSSALRGIP IIGSVISIIL SVSLGYLGLI IGVKRKEEVL GFFTFLPKFK GDKGEKGKGK DGNRQSLGAA LPNYKILDTS VIIDGRIADI VQTGFLEGTL LIPGFVLEEL QHIADSSDLL KRNRGRRGLD ILNQISKEEL ANNVEIMEID FEDISEVDSK LVRLGQNLGA PILTNDYNLN KVAELQGVKV LNINELANAV KPIVLPGEEM EVQVMKEGKE PGQGVAYLDD GTMIVVDTGR RYMGQTITVL VTSVLQTAAG RMIFAKPKAL VEKKSIGLSG TNEVNALG
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