Gene Dhaf_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0392 
Symbol 
ID7257357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp434801 
End bp435277 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content43% 
IMG OID643560309 
Producttranscriptional regulator, CarD family 
Protein accessionYP_002456895 
Protein GI219666460 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000000000362697 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATA TCGGAGATAG AGTGGTTTAC CCTATGCACG GGGCAGGTAT CATTGAAGCT 
ATCGAAGAGC GGGAAGTTCT TGGCGAGTCC CATCAGTACT ATGTCATGAA TATTCCCGTA 
GGGAATATGA AGGTTTATAT ACCTTTAAAA AATGTGAATC AATTGGGTAT ACGGGGGGTT 
ATCTCTTCCG AAGAGGTGCC TCAGGTTTTA AAAATTCTAG AAAATGAAAG TACTCTGCCT 
GCTTTGGCCT GGAACAGAAG ATACCGGGCC AATATGGATC GAATAAAAAG CGGGGATATA 
TATTCTGTTG CGGAGGTGGT GCGCAGTCTT TCTCAAAGGG ATAGGGAAAA GGGCTTATCG 
ACAGGTGAGA AGAAAATGTA TGATAATGCT TATCAGATTC TCGTCAGCGA ATTGATTCTG 
GCCGAGGGTG TGCAAGCAGA TGAAATGTCA GAGAGAATTA AGGGACTTCT TGCCTAA
 
Protein sequence
MFDIGDRVVY PMHGAGIIEA IEEREVLGES HQYYVMNIPV GNMKVYIPLK NVNQLGIRGV 
ISSEEVPQVL KILENESTLP ALAWNRRYRA NMDRIKSGDI YSVAEVVRSL SQRDREKGLS 
TGEKKMYDNA YQILVSELIL AEGVQADEMS ERIKGLLA