Gene Dhaf_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0303 
Symbol 
ID7257268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp337862 
End bp338548 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content44% 
IMG OID643560220 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002456806 
Protein GI219666371 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGCA TCATTCCAAA TATCTATTCT CAGCCAACGG ATACAAACCT ATGGAATATT 
CTCTTAAGCA GCGGGATACC AAGGCATTAT CAAAAAGGAG AATTTGTCTT CGAGAAGGAT
CAACCCAGCA ACGGACTTAT TTGCCTAAAG AAAGGCAAAG TTAAAGTCTC CAGCTTTTTC
TCCGAGGGAA GTGAAAAAAT CTTCGGCATC CTTGTCGCCC CCGCACTGTT CGGGGAAACA
GAAACCCTGG ACCAAGGCCC GCGCATGGTT TCCGCAACCG CTCTGACCCA TGTTGAAATC
GTTGCCATTT CCGGGAATAA GACGAAGGAG CTTATCTATA CCTATCCGGA CATTGCTTTA
TCGATTATTC AATCCATCGG AGTTAAATTA AGATGGACAA CCTTGCAGGC TGAAGATTTA
TCCACGCAAA AAATCGAGTA CCGGCTGGCA AGATTATTGC TGGATTTCAA ACACTATGGT
ATCTTCACCA GTAAAAACAA CGATAACTGC CTGATGATTA CCCATGAAGA GCTGGCCCAC
TTTATTGGCA CAGCTCGTTC CAAGGTAACG ACTTATCTTA ACGAATTTGC CCATAAAGGC
CTTATCCGGC TTAGACGAGG AGAAATAAGA ATTCTGGATA CTGCAGGGCT CAACAAGTAT
AAATATACCC ATAAGAGCCA GGCATAA
 
Protein sequence
MSCIIPNIYS QPTDTNLWNI LLSSGIPRHY QKGEFVFEKD QPSNGLICLK KGKVKVSSFF 
SEGSEKIFGI LVAPALFGET ETLDQGPRMV SATALTHVEI VAISGNKTKE LIYTYPDIAL
SIIQSIGVKL RWTTLQAEDL STQKIEYRLA RLLLDFKHYG IFTSKNNDNC LMITHEELAH
FIGTARSKVT TYLNEFAHKG LIRLRRGEIR ILDTAGLNKY KYTHKSQA