Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0301 |
Symbol | |
ID | 7257266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 336031 |
End bp | 336828 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643560218 |
Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
Protein accession | YP_002456804 |
Protein GI | 219666369 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACGGT ACGTTCGTTT TAATAATGGT AATAAGATTT GCTTTGGATT AGTCAAAGGA GATAGAGTTG CGGAGCTGAG CGGTGAGGAG CCTGCTGATT TTAAAGAATC CGGAATAGAG CATGAGCTTT CCGCCCTTAA GCTATTGGCC CCTTGCCACC CTACGAAAGC AGTCTGTGTT GGGCTTAATT ATAAAGACAC AGTCCTCGAA CCAGGGGCAC AATGGCCTAA GGAACCTCTT TTATTTATCA AGCCATCGAC AAGCGTTGCA AATCCTGGAG ATGATATTAT CAAATGGGCA ATGGCGGAGG AGTTGGCTTT TGAAGCGGAG TTGGCCGTTG TCATAGGAAA AAGGGCGCAC CTGGTGCCTG AAGAGGAGGC TCATGACTAT ATCTGGGGGT ATACAATCGC TAATGATGTA ACGGCAAAGG ATCTGCAGAA GGCCGACATC CTATGGACCC GCTCAAAGTC CTTCGATACC TTTCTCCCTT TGGGGCCCTG GATCGTCAGT GGAATTAATG CCGATAATTT AATGATTACT TCTTCGGTAA ACGGTCAGGA GAAGCAAAAA GGTACTACTG CCGATTTAAT TTTCGGCATA GAGTACCTGG TAAGCTTTAT TTCTCACATT ACAACGTTGC TGCCGGGAGA TATTATTTTG ACAGGTACAC CTGGCGGCTA TGGTTCGTCC CTGGATGTTA ATGATAAAGT TGAAATTGAA ATATCAGAAA TCGGCAAATT AGTGAACACT TGTAAAGTAA GCTCAGAGAG CTGGAGTCTT GCGCCACGCC ATAAATAG
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Protein sequence | MERYVRFNNG NKICFGLVKG DRVAELSGEE PADFKESGIE HELSALKLLA PCHPTKAVCV GLNYKDTVLE PGAQWPKEPL LFIKPSTSVA NPGDDIIKWA MAEELAFEAE LAVVIGKRAH LVPEEEAHDY IWGYTIANDV TAKDLQKADI LWTRSKSFDT FLPLGPWIVS GINADNLMIT SSVNGQEKQK GTTADLIFGI EYLVSFISHI TTLLPGDIIL TGTPGGYGSS LDVNDKVEIE ISEIGKLVNT CKVSSESWSL APRHK
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