Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0194 |
Symbol | |
ID | 7257155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 217448 |
End bp | 218164 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643560108 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002456698 |
Protein GI | 219666263 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000195939 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTTAG ATCCTCATAA TCCGCTGCCC TTACATGCTC AGATTACGAA TATTTTACGA AAAAGAATCT TCGAAGAGAA TCTAACGGGA AAGATTCCCA GTGAAAGGGA ATTGATGGAT TACTTTGCAG TGAGCAGGTC GACTGTTCGG GAAGCCATTG AGGCCTTGGT TCGGGACGGC ATTCTTGAGA AAAAGCATGG CAAGGGCACC TTTGTAGCAG TTCGGCCGAT TAAAGAAGAG TGGATAGGTA CCTTCAGCTC CTATACTGAG ACGATCGAAA GAGCGGGTAT GAGGTCTGGA GCAAAGCTGC TTTCGTGTAA TATTAAGAGA GAGCCTGCAT ATATTGCCGA GATGTTTGGC GGAGAAGAAT TCTATATGAT CAAACGCCTC AGGTATGCCA ACGATCAAGT GATAGCTATT GAGCGCAAAT GTTTCGATCT GGAAACAGGT CGGAGATTAT TGGATTATGA TCTTAACGCC AATATATATA AGATTATGGA AAGCTCCCTG GGCATAGTTC TTTGGGAGGC TGATGAAATT GTTACCAGTG CGATACCAAG CAAGGAGGAC GCACTTCTAT TGGAGGTTCC CAAGCGATCC AGTGTTTTAG TAACGGAACG TTCCAGCTTT GATTCCGACC ATAAACTTAT TGAATTTGTA CAAACTATGT TTAGGGCAGA TAAATATTCT TTTCGCATTA AAATGTCTCG GAATTAA
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Protein sequence | MVLDPHNPLP LHAQITNILR KRIFEENLTG KIPSERELMD YFAVSRSTVR EAIEALVRDG ILEKKHGKGT FVAVRPIKEE WIGTFSSYTE TIERAGMRSG AKLLSCNIKR EPAYIAEMFG GEEFYMIKRL RYANDQVIAI ERKCFDLETG RRLLDYDLNA NIYKIMESSL GIVLWEADEI VTSAIPSKED ALLLEVPKRS SVLVTERSSF DSDHKLIEFV QTMFRADKYS FRIKMSRN
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