Gene Dhaf_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0178 
Symbol 
ID7257132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp195665 
End bp196522 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content50% 
IMG OID643560085 
Productagmatinase 
Protein accessionYP_002456682 
Protein GI219666247 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01230] agmatinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000300631 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGA CAGAAAGCCC CGGTGTGTTT ATGGGAGGAG AAACCCCTTA TGAAGAGGCT 
GACGCGGTAA TTTTGGGGAT TCCTATGGAT TATACGGTGA GTTTTCGCCC GGGTACCCGT
TTGGGCCCCC TGAGTATCCG CAATGTCTCC ATCGGGATTG AGGAATATAG TGTGTATCTG
GATAAGGATC TCTCTGATTA TGCTTATTGC GATTGTGGAG ATTTAAGCCT GCCCTTTGGC
AATGTTGAAA AATCTTTGCA AGTGATCGAA GCCGCTGCCC GGCAGGTGGT AGAAGACGGG
AAATTTCCCA TTTTCTTAGG GGGAGAACAC CTGGTTACCT ATCCTTTGCT TAAACCCTTC
ATTGAGAAGT ATCCTGAGCT CCGGGTGGTG CATTTTGACG CCCATGCCGA TTTGCGTACA
GATTACTCCG GTGAGCCTAA TTCCCATGCT ACGGTGATGC GCAAAATCTC GGAAGCTCTG
GGGCCCCACC GGGTCTACCA GTTTGGCATA CGCTCCGGAA CCCGGGAGGA ATTCCTTTTT
GCTAAGGAAC ACAATCATTT GGTGGTAGAA GAGGTTTTGG AGCCCCTCAA GGCTGTCCTG
CCGGAGCTTA AAGGGAAGCC GGTCTATGTG ACGCTAGATA TTGATGTGGT GGATCCGGCC
TTTGCCCCAG GCACTGGGAC TCAGGAAGCC GGTGGATGTA CTTCCCGGGA AATCATCAAA
GCCGTTCATG CCCTCAGTGA GCTGGATGTG GTGGGCTTTG ATCTGGTGGA AGTATCCCCT
CTTATGGACA CCAGTGAGCG TACGGCTCTT TTAGCAGCGA AGATCGTAAG GGAAGCAATT
TTGAGTTTTG TAAAATAA
 
Protein sequence
MKMTESPGVF MGGETPYEEA DAVILGIPMD YTVSFRPGTR LGPLSIRNVS IGIEEYSVYL 
DKDLSDYAYC DCGDLSLPFG NVEKSLQVIE AAARQVVEDG KFPIFLGGEH LVTYPLLKPF
IEKYPELRVV HFDAHADLRT DYSGEPNSHA TVMRKISEAL GPHRVYQFGI RSGTREEFLF
AKEHNHLVVE EVLEPLKAVL PELKGKPVYV TLDIDVVDPA FAPGTGTQEA GGCTSREIIK
AVHALSELDV VGFDLVEVSP LMDTSERTAL LAAKIVREAI LSFVK