Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0163 |
Symbol | |
ID | 7257112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 169967 |
End bp | 171433 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643560065 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_002456667 |
Protein GI | 219666232 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000142799 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGAAA TGAATGATCT CTGGCGGGTT CGCCTGGACA AGCTGGCTCA GTTAAGAGAA AATGGGGTAG AGCCTTATGC GGATCGCTAT CAGAGAACTC ATATGGCCCA AGAGATTCTG GATGGATTTG ATACCCTTGA GGGTCAAGAG GTCAAGATTG CCGGTCGTAT GATGTCCAAA AGGGACCAGG GTAAAGTGGT ATTTACCCAT ATACAGGATT TCAGCGGCCA GATCCAAGCT TATATCCGTA AGGATGATGT GGGCGAAGAC TGGTTTGAAC TGATTTCTAA GTTTGATATT GGTGACATCG TTGGCATTAA AGGTACCGTG TTCCGGACAC GGCGGGGAGA AATCTCCGTG CATGCCAATG AGGTTCAGAT TTTATCCAAA TCAATGCGCC CTTTGCCGGA GAAATTTCAT GGCTTAACTA ATGTTGAACT CCGCTATCGT CAACGGTACG TGGATCTGAT TATGAACCCG GAAGTCCGCA ATGTCTTTGT TATGAGAAGT AAGATTATCC GCTCCATGAG GAACTTCCTG GAAGGTCAAG GCTTCCTGGA AGTGGAGACG CCTACTCTCC ATACGATTCC GGGTGGGGCT GCTGCCCGCC CCTTTATCAC CCATCACAAC ACTTTAGATA TGGATCTTTA TTTGCGCATT GCCCTGGAGC TTCCTTTAAA GCGATTAATT GTCGGAGGCT TTGATAAAGT ATTTGAGATA GGAAGAAACT TCCGCAATGA AGGGATTTCC ATTAAGCATA ATCCGGAGTT CACGATGATG GAGCTCTATC AGGCCTACGC AAACTTTGAG GATATCATGG AACTCACCGA GAACATGATC TCCGCCATCG CCAAAGAAGT TCATGGAACC ACCGAAGTAA CCTATCAAGG TCAAATGATT GATTTTAAAA CACCTTGGCG CCGCCTGCCC ATGCTCGAAG GCATCTTAGA ATATGGTGGA GTGGATTTCA GTCAGATTCA TACAGATGAA GAAGCACAAC AGGCCGCTAA GGAAAAGGGC CTTAAGGTCG AACCGGGAAG CTCTCGTGGC AAGATCATTA ACGAATTTTT TGAAGAGTTT GTCGAGCCCA ATCTCATCCA ACCGACGTTT GTTATCGGTC ATCCGGTAGA GATTTCTCCT CTAGCTAAGA GAAATGCTGA ACATCCTGAA TATACGGATC GTTTTGAAGC TTTTGCTTAT GGTAGAGAAT TAGGGAATGC TTTTTCGGAA TTAAATGATC CTATCGATCA AAGACAGCGT TTCGAAGCTC AAGTGGCTGA GCGGGATAAA GGTGACGATG AAGCCCATAT GATGGATGAA GACTTCGTCC AGGCTTTGGA GTACGGTCTT CCGCCTACAG GGGGATTAGG AATCGGTATC GACCGCTTGG TGATGCTTTT GACCGATTCA GCGTCCATCC GGGACGTCAT CCTTTTCCCC ACGATGCGGC CCAGAGAAGA CGATTAA
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Protein sequence | MDEMNDLWRV RLDKLAQLRE NGVEPYADRY QRTHMAQEIL DGFDTLEGQE VKIAGRMMSK RDQGKVVFTH IQDFSGQIQA YIRKDDVGED WFELISKFDI GDIVGIKGTV FRTRRGEISV HANEVQILSK SMRPLPEKFH GLTNVELRYR QRYVDLIMNP EVRNVFVMRS KIIRSMRNFL EGQGFLEVET PTLHTIPGGA AARPFITHHN TLDMDLYLRI ALELPLKRLI VGGFDKVFEI GRNFRNEGIS IKHNPEFTMM ELYQAYANFE DIMELTENMI SAIAKEVHGT TEVTYQGQMI DFKTPWRRLP MLEGILEYGG VDFSQIHTDE EAQQAAKEKG LKVEPGSSRG KIINEFFEEF VEPNLIQPTF VIGHPVEISP LAKRNAEHPE YTDRFEAFAY GRELGNAFSE LNDPIDQRQR FEAQVAERDK GDDEAHMMDE DFVQALEYGL PPTGGLGIGI DRLVMLLTDS ASIRDVILFP TMRPREDD
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