Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0112 |
Symbol | |
ID | 7257061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 115807 |
End bp | 117990 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643560015 |
Product | ABC transporter related |
Protein accession | YP_002456617 |
Protein GI | 219666182 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTAAAAA AGAAAATCGT CAAGGTTCCC ACCGTGCTGC AGATGGAGGC GGTAGAGTGC GGAGCGGCAT CTCTGGCTAT GATTCTGGCT TATTACGGAA AGTATATCAC TCTGGAGGAA TTAAGAATTG CCTGCGGGGT ATCCCGGGAT GGGAGTAAAG CCAGCAATCT TCTGAAAGCC GCCAGGAATT ATGGCCTGGA AGCGAAGGGT TACCGAAAAG AACCGGAAGC CCTGCGCAGG ATGCCCCTGC CTCTGGTCAT TCACTGGAAT TTCAGCCACT TCCTCGTTCT CGAGGGCTTC CATAAAGGAA AAGCAGTCCT GAACGACCCG GCGGCAGGTA GGAGAACCGT TTCGGAGGAA GAATTCAATC TGGCTTTTAC GGGTATTGTT CTTTCCTTTA CACCGACAAC TGAATTTCAA AAGGACAGCA GAAAGCCTGG TTTGAGCCTG GCCTTAAGAA GAAGGCTTAA AGGCTCGGAG CAGGCCCTGA TCTATATCAT TCTATTGGGT CTGGCCTTAG TCATTCCCGG CTTGATAATC CCTGTGTTTT CCAGAGTATT TGTCGATGAT ATCCTGTTGG GCGGTCTCCA TTCCTGGGTG TGGCCCTTGC TGCTGGGGAT GGGCATTACG GCAATGCTCA GGGGAGTTTT AACCTGGATG CAGCAATATT ATTTGCTTAG ATTGGAGACG AAAATCGCCT TAGCCACCTC CGGTCAGTTT CTGTGGCATA TTTTTCGGCT GCCCAGTGAA TTCTTTTCCC AGCGGGCGGC CGGTGAGCTT ACGTCCAGGA TACAAAGCAA CGATAAGGTG GCGAAGCTCT TGTCAGGTAA ACTGGCCACT ACGGCACTGA ATGTCCTCAT GATTATGTTT TACTTTACTT TAATGCTCAC CTATAGCTGG ATTTTAGCCT TGGTAGGGTT GGCAATCGCT TTCATCAATG TAGGTTACTT GATTGCGGTT TCGGCCCGGA GAGTCGATTT GAATCGCAGA TTACTTCAAG ATGAGGGGAA GCTGATTGGC TCGAGTATGG CGGGTCTCCA AATTATCGAG ACTCTCAAAG CCACAGGCTC GGAAGCCAAC TTCTTTGCCC AATGGTCGGG ATATCAGGCG AAATTGCTCA ATGCTGAACA GGAGCTGGGA GTTTCTTCAC AGTTTTTATC CGTATTCCCC AGTTTTCTAA CCGGCATCAA TAACGCCCTT GTCCTGGTGA TCGGCGGTTT TTTGATTCTC GATGGTCAAA TGACCATCGG CATGCTGGTA GCTTTCCAAA GCCTGATGAG CAGCTTCATG ACGCCGGTCA CCGGACTGGT GGGTCTCGGC GCTGAGCTTC AGGAAATGAC AGGTGAGATG AATCGTTTAG ATGATGTATT AAACTATCCA CTCGGTCGGG ACCAAGGGGA CCAGGGGGGT CGGGGGGAGC AGGAGGGTTT AGGGGGGACA GCCGAACCCC CGGCAGGGCA GAAGCTATCC GGCTACGTGG AACTCAGGAA CATTACCTTT GGCTATAGCA TCTTGGAACC GCCATTGATC GAGGATTTCA GCCTAAGCCT GAGGCCGGGG TCACGGGTGG CGCTCGTAGG CGGCTCCGGC AGCGGAAAAT CTACCATCGC CAAAATCATC GCCGGCATCC ACCATCCCTG GTCAGGTGAA ATTCTCTTTG ATGGGCAACC CCGCGCCTCT TTCACCAAGG AAGTGCTCAG CAATTCCCTA GCTATGGTGG ATCAGGAAAT ATGTATGCTT CAAGGGACGG TCAAAGAGAA TATTACCCTC TGGGACGGAA CCATTTCGGA GTTCGGGATG ATCCGGGCTG CCAGGGATGC CTGTATCCAT GATGAGATTA CCGCCCGACC GGGGGGCTAT GAACAAATGG TGGAGGAAGG CGGTAAAAAT TATAGCGGCG GTCAGAGGCA AAGGCTGGAG ATCGCCAGAG CTTTAGCCCA AAACCCGGTC ATTCTGATTA TGGATGAAGC CACCAGTGCA CTTGATCCTA TAACAGAGAA GAATGTGGAT GAATATATTC GTTATCGGGG GTGTACCTGC ATCATTGTTG CCCATCGCCT CAGTACCATA CGGGATTGTG ACGAGATCAT TGTACTGGAA AAGGGGAAGA TTATTGAGCG GGGAACCCAT GGGTCCCTGT ATGAGCGTGC GGGAACTTAT GCCAAACTGA TTGCCACAGG TTGA
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Protein sequence | MVKKKIVKVP TVLQMEAVEC GAASLAMILA YYGKYITLEE LRIACGVSRD GSKASNLLKA ARNYGLEAKG YRKEPEALRR MPLPLVIHWN FSHFLVLEGF HKGKAVLNDP AAGRRTVSEE EFNLAFTGIV LSFTPTTEFQ KDSRKPGLSL ALRRRLKGSE QALIYIILLG LALVIPGLII PVFSRVFVDD ILLGGLHSWV WPLLLGMGIT AMLRGVLTWM QQYYLLRLET KIALATSGQF LWHIFRLPSE FFSQRAAGEL TSRIQSNDKV AKLLSGKLAT TALNVLMIMF YFTLMLTYSW ILALVGLAIA FINVGYLIAV SARRVDLNRR LLQDEGKLIG SSMAGLQIIE TLKATGSEAN FFAQWSGYQA KLLNAEQELG VSSQFLSVFP SFLTGINNAL VLVIGGFLIL DGQMTIGMLV AFQSLMSSFM TPVTGLVGLG AELQEMTGEM NRLDDVLNYP LGRDQGDQGG RGEQEGLGGT AEPPAGQKLS GYVELRNITF GYSILEPPLI EDFSLSLRPG SRVALVGGSG SGKSTIAKII AGIHHPWSGE ILFDGQPRAS FTKEVLSNSL AMVDQEICML QGTVKENITL WDGTISEFGM IRAARDACIH DEITARPGGY EQMVEEGGKN YSGGQRQRLE IARALAQNPV ILIMDEATSA LDPITEKNVD EYIRYRGCTC IIVAHRLSTI RDCDEIIVLE KGKIIERGTH GSLYERAGTY AKLIATG
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