Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0106 |
Symbol | |
ID | 7257055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 110681 |
End bp | 111283 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643560009 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002456611 |
Protein GI | 219666176 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 73 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA GTATCCTGGC AAAGGGGGGA GCGACCATAG TCACTCAAGT GGAAAAAAGA GAGTTGATTG GACTTGCTCA AAAGGATGAG ACATCCTTTA CGGAACTATA CAATGTTTAC TTTCCCCGGA TTAATAATTA TGTGCATTAT CGGGTGGCAG ATTATCATGA TGCCGAAGAT CTGGTCAGCC AAATCCTTGA GAAAGTGTTT ACCAAAAGTC ACTCTTACCA AGAGAACAAA GCTCCTTTTT CTGTCTGGCT TTTTCGCATT GCTCGTAACA CCATTACCGA TTACTATCGC AGCCGCAAGG GAGTACATAA TATTTCCCTT GATGGCTATA CAAGAGATAT CGTGGCCCGT GAGCCGGAAC CGGTAGAAAT TGTGGAATTA AATGAGCTCC AGCACCATCT CCTCAAGGCC ATTGCTTCTT TAAGCCAACG TGAGCAGGAG ATCATTGCGT TAAAGTTCTG GAGTGATTTA AGCAATCGTG AGATCGCCAA GCTTGTTGGC ATCAGCGAAA GCAATACAGG TGTCATCCTC TTCCGGGCCA TGCGGCAGCT GCGCCTAATC CTGGCAAGCC AAGGGATGTG TATCTATGAA TGA
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Protein sequence | MNKSILAKGG ATIVTQVEKR ELIGLAQKDE TSFTELYNVY FPRINNYVHY RVADYHDAED LVSQILEKVF TKSHSYQENK APFSVWLFRI ARNTITDYYR SRKGVHNISL DGYTRDIVAR EPEPVEIVEL NELQHHLLKA IASLSQREQE IIALKFWSDL SNREIAKLVG ISESNTGVIL FRAMRQLRLI LASQGMCIYE
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