| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0048 |
|---|
| Symbol | |
|---|
| ID | 7256995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 45892 |
|---|
| End bp | 46755 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643559950 |
|---|
| Product | Protein of unknown function DUF1980 |
|---|
| Protein accession | YP_002456553 |
|---|
| Protein GI | 219666118 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3689] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000161282 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCCA AAGCATTTAA TCCTCAGATC TTTCTGGAGT TCTTATGCTA TTGTGTTTTT
GGGGGATTGA TCTTTTATTT GGTGAGCAGT GAAAAATATC TTACTTATGT CACACCCCGG
TTGAAGCCCT ATCTCTATTT TACGTCCATC GTCATGGGTG TATGGGCCTT GACCGCTTTG
GGCAGATTGT TTCGCCCCCA GCATAAACTG CGCTCCGCCC ACTGCTTTGT GTTGGTGATC
CCCATCGTAT TGCTGTTGCT TCCCCATGCC CCTGTCAGCG CGTCCAATCT TTCCGGCAAT
TATATCGGCG GCAGCGCTTT TTCCAACCGT TCCGGCCAAA GCGCTTTGAG CATGCAGAAC
GACCTTTCTA TTACTATAGA GGATGCTTCA TCTCCGGAAG ATAAGGTACA GGCTGAAATT
ATTCAGGAAC CCCTTGCCGG ATTGCCGGCC GGTGCCTATG TCTCGGAGCT GCCCGGCTTG
GATATGGGGA ATAAAAGAAT CACAGTGGCC CATGAAGATT TCAGCATGTG GCTTACGGAA
ATGTATACCA ATATAGAGAA ATATCAAGGG TATACAGTGG TTATGACGGG ATTTGTTTTC
AATGATCCTG AATTTCTTAA GGAAGATGAA TTTGTGCCGG CCCGCTTGAT GATGTCTTGC
TGTGTTGGGG ATTTGGCACC TGCCGGGATA CTCTGTAAAT ATGATCAGGC TGACCAGCTC
CAGGCAGAGT CGTGGGTGAC GGTTGAAGGA ACCCTTACGC TGGGACAGCA TGAGTATGAC
GGTGTGCTAT CTGATGAACC CCAGATTAGG GTAACGAAAA TTACACCGGC AGAGGCTGTG
GAAGGTTATA TCTATCCTTA TTGA
|
|---|
| Protein sequence | MPAKAFNPQI FLEFLCYCVF GGLIFYLVSS EKYLTYVTPR LKPYLYFTSI VMGVWALTAL
GRLFRPQHKL RSAHCFVLVI PIVLLLLPHA PVSASNLSGN YIGGSAFSNR SGQSALSMQN
DLSITIEDAS SPEDKVQAEI IQEPLAGLPA GAYVSELPGL DMGNKRITVA HEDFSMWLTE
MYTNIEKYQG YTVVMTGFVF NDPEFLKEDE FVPARLMMSC CVGDLAPAGI LCKYDQADQL
QAESWVTVEG TLTLGQHEYD GVLSDEPQIR VTKITPAEAV EGYIYPY
|
|---|
| |