Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0039 |
Symbol | |
ID | 7256986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 37311 |
End bp | 37919 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643559941 |
Product | ABC transporter related |
Protein accession | YP_002456544 |
Protein GI | 219666109 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.118925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTGC TGGGAGAGAA CCTGGGGGTT TATTATAAAA AGGATCAGTG GATTTTTAAG AACATGAACA TCAAGGTGTT ACCCGGCCAA GTTCTTGGTT TATCCGGATA CAGCGGCTGC GGTAAAACGA CCCTGGCCAG AGTTTTAGCC GGATATATCC TTCCTCAGAC CGGCAGGGTA AGCGTGGATT CTAAGCCTTT GGCGCCAAAA AGCTTTCGCC CGGTCCAATT AATTTATCAG CACCCGGAAA AGGCCATCAA TCCCCGCTGG AAAATGGAGG ATGTCTTAAC CGAAACCTAT ACCCCTTCCC AGGATATCCT GGATGCTTTC GGCATCCGGG AGGATTGGCG GAAGCGCTGG CCCATCGAGC TCTCCGGCGG AGAGCTGCAG CGGTTTTGTA TCGTGCGTGC TTTGAACCCA CAGACCCGGT ATATTATTGC CGATGAAATG ACCACCATGC TGGACGCTAT TACCCAGGCC AGAATTTGGC ATAGTTTTCT CCATATTTGC CAAAGCAGAA AGATTGGTGT AATTGTGGTC AGCCATGAGC TCAGTCTTCT GAACCGCCTG TGTGACAAGG TCATTCAAGT GGGGAATACG TGGGAGTAA
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Protein sequence | MALLGENLGV YYKKDQWIFK NMNIKVLPGQ VLGLSGYSGC GKTTLARVLA GYILPQTGRV SVDSKPLAPK SFRPVQLIYQ HPEKAINPRW KMEDVLTETY TPSQDILDAF GIREDWRKRW PIELSGGELQ RFCIVRALNP QTRYIIADEM TTMLDAITQA RIWHSFLHIC QSRKIGVIVV SHELSLLNRL CDKVIQVGNT WE
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