Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0011 |
Symbol | |
ID | 7256958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 12608 |
End bp | 13465 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643559913 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002456516 |
Protein GI | 219666081 |
COG category | [K] Transcription [S] Function unknown |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins [COG3708] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000871788 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATGGA TTGAAGGCAT TAGTGACGCA ATCAACTATA TCGAAGACAA TATCACCGAA GAACTGAACA TGGAAAATAT TTCCAAACAA GCATTTGTGT CCTCGTTTTA TTTCCAAAAG GGCTTTGCCA TGCTTTGCGG TTTTACGGTC GGAGAGTATA TCCGGCAGCG CAGGCTCACC CTTGCCGGCA GTGAGCTTGT TTCTACTGAT AGAAAAATTA TTGATATTGC TTTGAAATAT GGTTATGACT CACCAGATAG TTTCACAAAG GCTTTCCTTC GTTTCCACGG TGTCACACCT ACTGCTGTTC GAAAAGACGG AGCAATGCTC AAATCTTTTG CTCCCCTAAA AATCAAATTT TCATTGGAAG GCGGTTTTAT CATGGATTAC AGAATTATTG AAAAAGAAGC GTTCACTGTC ATGGGTGCAG CCAAGGTGTT TAAGTATGAT ACTGCGGGAA CAGAGATTCC GAAGTTCTGG ACAGAACATT ATCAAACGGG AAAAGACAAG ATAGTATGCG GAATGTATGG AGTATGTGTA GATGAGAGCA TGGGTTCAGA TGAGTTCGAA TATCTGATTG CAGACAATTA CACTACCTCC AGTGAAATTC CGGATGGATT TGTTACAAAG GTTATTCCGA AACACTCCTG GGCTGTTTTT GCCTGCAAAG GTGCTATGCC CACATCCCTG CAAAATACGA ACCAAAAAAT CTTCTCCGAA TGGCTGCCTA ACTGCAAGGA TTATGAAATT GCAGCGGGTT ACAATATTGA AATGTACACC AATGTAGCGG ATTATCCTAA AGGGAATCAG GATGAAAACT ACTACAGCGA AATATGGATT CCTGTTCAGA AAAAATAA
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Protein sequence | MGWIEGISDA INYIEDNITE ELNMENISKQ AFVSSFYFQK GFAMLCGFTV GEYIRQRRLT LAGSELVSTD RKIIDIALKY GYDSPDSFTK AFLRFHGVTP TAVRKDGAML KSFAPLKIKF SLEGGFIMDY RIIEKEAFTV MGAAKVFKYD TAGTEIPKFW TEHYQTGKDK IVCGMYGVCV DESMGSDEFE YLIADNYTTS SEIPDGFVTK VIPKHSWAVF ACKGAMPTSL QNTNQKIFSE WLPNCKDYEI AAGYNIEMYT NVADYPKGNQ DENYYSEIWI PVQKK
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