| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2683 |
|---|
| Symbol | |
|---|
| ID | 4073914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008010 |
|---|
| Strand | + |
|---|
| Start bp | 345838 |
|---|
| End bp | 347040 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641228793 |
|---|
| Product | ROK domain-containing protein |
|---|
| Protein accession | YP_594190 |
|---|
| Protein GI | 94972150 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAG TGCCTATCCA TGCCCGCGCC GGAGACCAGG GTTTCCTCAA GCAGCTCAAT
CGGTCGGCCG TTCTGGAGTT GATTCGGCGC GAGCCGGGCA TCTCCCGGGC AGAACTGGCC
GCGCGCACCC AACTCACCAA GGTCACCGTC GGCGCGATGG TCCAGGAACT GCTGGATCAG
GGCTGGTTGG TCGAGGGGAG TTTGCAGCAG GGAAGCCTCG GACGTCCGGG GCGTGCCCTG
CACCTCAACG AACGGCGGCA TGTTCTGCTG GGTGCGGAGG TTGGCGTCCA GGGCCTGCGG
GTGGTGGCCT GCACATTGAC CGGCCGGGCC CTTGGGCAGC GCGCTATCCT CGTCCCCTCG
ACCACTCCCG AGGCCACCGC CCAGCATCTG GCTACCCTGA TTATGGAAGT GCTGACCTAT
CCCGAGGTGG CGGGCCGGGA GGTGCTGGGC CTGGGGGTGG CAGTCCCGGG GCCCGTGGCG
CTCCACGATC CCACCCTGCT GTTCGCCCCG AACCTGGGCT GGCGCGACGT GCCCTTCCTC
ACGGTCCTGA AGCCATTCCT GCCTGATCTA CCCGGGCCCT GGCTGCTCGA AAACGAGGCG
AAGGCCGCCG CGTTCGGGGA GGTTTACTTC TCCGGGGGAG ACAAGCCGGA ACTGCTGGCC
TACCTGAGCC TGGGGACGGG CATCGGCAGT GGCCTTATGG TAGGCGCCCC CGTCCCTTAC
CTGTTGCGTG GCGCCCAGGG TCTGGCGGGT GAGATCGGGC ATTCCGTGCT GCAATCAGGA
GGACTGTATT GTCACTGCGG GAACCGCGGC TGTGCCGAAA CCCTGGTCAG CGGCTGGGCC
ATTCGCGCCG CGCTGGACAT TCCCCCCGGC GTCCCCCTAG AGCCCGCCCT CCAGCCCCGC
ATGCAGGATG CGGACGTGCA GGTCACCCTT CGGCGCGCAG GGGAAGCGTT GGGGATGCTC
CTGACGAACC TACACCACAC CCTCAACCCC AGTGACATCG TGCTCGGGGG CTCACTGACC
CGCCTGGGTG AACCGCTACT TGGGCCCGCG CTAGCCTTCT TTAGGGAGCA CCAACATGAC
CTGTATACCC GTACAGCATC GATCAGCATT CACATCCGTA CGGACAGCAC CTTCCTTCCA
GCACGCGGGG CTGCAGCACA AGTTCTGGCC AGCGTTTTTC ACGAGTCGAG TGTCTTGGGT
TGA
|
|---|
| Protein sequence | MTSVPIHARA GDQGFLKQLN RSAVLELIRR EPGISRAELA ARTQLTKVTV GAMVQELLDQ
GWLVEGSLQQ GSLGRPGRAL HLNERRHVLL GAEVGVQGLR VVACTLTGRA LGQRAILVPS
TTPEATAQHL ATLIMEVLTY PEVAGREVLG LGVAVPGPVA LHDPTLLFAP NLGWRDVPFL
TVLKPFLPDL PGPWLLENEA KAAAFGEVYF SGGDKPELLA YLSLGTGIGS GLMVGAPVPY
LLRGAQGLAG EIGHSVLQSG GLYCHCGNRG CAETLVSGWA IRAALDIPPG VPLEPALQPR
MQDADVQVTL RRAGEALGML LTNLHHTLNP SDIVLGGSLT RLGEPLLGPA LAFFREHQHD
LYTRTASISI HIRTDSTFLP ARGAAAQVLA SVFHESSVLG
|
|---|
| |