Gene Dgeo_2633 details

Gene Information

• Locus tag: Dgeo_2633
• ID: 4073864
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Deinococcus geothermalis DSM 11300
• Kingdom: Bacteria
• Replicon accession: NC_008010
• Strand: -
• Start bp: 409500
• End bp: 410198
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641228842
• Product: CRISPR-associated Cas5e family protein
• Protein accession: YP_594141
• Protein GI: 94972101
• TIGRFAM ID: [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e; [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.405174
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAACCC TGCTCCTGCG GCTGGTGGCC CCCATGCAGG CCTGGGGCAC CCGCAGCCGC 
TTTGACGACC GCGACACCGA GGCCGAGCCG AGTAAAAGCG GCGTGCTGGG TCTGTGCGCG 
GCGGCGCTGG GCATCGACCG GGCCGATTCC GTGGAGCACC TCGCCCGCCT GGCCTTTGGG 
GTGCGGGTGG ACCGCGAGGG GGTGGCGGGT ACGGACTACC ACACCGCCCA GCTGCGCCCT 
GGCAACCCCC GGACGAGGAC CGATGTGACG CGCCGCGCCT ACCTCGCCGA TGCCGCCTTC 
TGGGCTGGGC TGGAGGGGGA CGCGGGCTTG CTGACTGACC TCGACGCTGC GCTGCACAAC 
CCCCACTGGC CGCTCTCACT GGGGCGCAAG GCTTTTCCGC CGAGCCTGCC TATTTGTGCT 
GGGCCTCCGC TGGAAGTGTC CTTGTGGGAC GCCTTGCGTA CTGCACCCAG CTTGCGCTGG 
AGGGATGACG ATGAGCCTTA CCGCCTCGTC CTCGACCGGG AAGCCGTGCC GCAGCCGCTG 
CGGGCCGCTG CTTCTCCCTC CCGCCGCCAG GACGTACCCG ACGGCCCCTT CGCCCGGCGG 
CGTTATCTCT CCCGCGACGT GCTGACGGTG ACGCTGCCCC TGACCCCGGA GCCTGACCCC 
CTGTTGCGAC GAACTTCCCC GCAGGAGGTG GGCGCGTGA 

 

Protein sequence

MATLLLRLVA PMQAWGTRSR FDDRDTEAEP SKSGVLGLCA AALGIDRADS VEHLARLAFG 
VRVDREGVAG TDYHTAQLRP GNPRTRTDVT RRAYLADAAF WAGLEGDAGL LTDLDAALHN 
PHWPLSLGRK AFPPSLPICA GPPLEVSLWD ALRTAPSLRW RDDDEPYRLV LDREAVPQPL 
RAAASPSRRQ DVPDGPFARR RYLSRDVLTV TLPLTPEPDP LLRRTSPQEV GA