Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_2620 |
Symbol | |
ID | 4073851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008010 |
Strand | - |
Start bp | 429159 |
End bp | 431288 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641228855 |
Product | phosphotransferase system, glucose-specific IIBC component |
Protein accession | YP_594128 |
Protein GI | 94972088 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [COG1264] Phosphotransferase system IIB components [COG2190] Phosphotransferase system IIA components |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR00830] PTS system, glucose subfamily, IIA component [TIGR02002] PTS system, glucose-specific IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACCC CCGCACCCGC TCTCCCACCG CGCCGCTCCG CCTTTGCCGC CCTTCAGGAG ATCGGCAAGG CGCTGATGTT GCCAGTCGCC GTGCTGCCTG CCGCGGGTCT GCTGCTGGGC TTCGGCTCGG CCTTCAATGA TCCCAGCTAC ACCTGGCACG CCTCCATCCC CCACTGGCTG CAATTCGTGG GCACACTGAT GGTGGGCGCG TCGAATGCCA TTTTTGGCAA CCTCCCCATC ATCTTTGCGC TGGGTGTCGC CATCGGTCTG GCGGCGGGCG CGGGCGTGGC GGCGCTGGCC GCGCTGGTGG GCTTCCTGGT GATGAACGCC ACCATGAGCG CCTACCTCGG CCTAGGGGAC GCCGCCAAGT TTGCGGACCT CAGCCGGGCG CAGCCGGGCG CGTATGCGAC GGTGCTGGGC ATTCCCACCC TCCAGACCGG CGTCTTCGGT GGCATTCTCA TGGGCCTGCT GTCGGCCTTC CTGTACAACC GCTACAAAGA CATCCGGCTG CCCGCTTTCT TAGGATTCTT CGCGGGGCGG CGTTTTGTGC CCATCGTGAC CGCCGCCGCT GCCATCGTGC TGGGGATCGT GCTCACGTAC CTGTGGCCGC CCGTGCAACA TGGCCTGAAC GTGTTCTCCA ATGTGGCGAC GCAGGGTGCT CCGGTTGCGG CGAGCGGCAT CTTCGGCTTC ATCAACCGCC TGCTGATTCC CTTCGGCCTG CACCACATCT GGTACCAGCC CTTCTGGTTC ATTGCGGGGG ACTACACCAA CCCGCAGACC GGCCAGGTGG TTCACGGCGA CCTGACGCGC TACATCGCAG GCGACCGCTC GGCGGGCATC TTCATGACCG GCTTCTTCCC GATCATGATG TTTGCGCTGC CCGCCGCCGC GCTGGCGATG GTCCAGGAGG CCCGCCCCGA GCGGCGCCGG GTGATCGCGG GCATCATGGC GAGCGCGGCG CTGACCTCCT TCCTGACCGG CATCACCGAA CCCATCGAGT TCGCCTTTAT GTTTGTCGCG CCCCTCCTGT ATGTGTTCCA CGCCGCCATG ACTGGCCTGA GCTTCGTGGT GATGAACCTG CTCGGCTCGC ACAACGGTTT TACCTTCAGT GGCGGCGCCA TCGACTACTT CCTGCTGATG CCCAAAAGCA CTCGGCCCTG GCTGGTGCCG GTGGTCGGTC TGGTGTTCGC CGCCATCTAC TACGTGGTCT TCCGCGCCGC CATCCGCCGC TTCAACCTGC TGACGCCGGG CCGCGAGGCC GTGACCACCG AGGACACCGC GACGGCCACC GTCCTGCCCA GGGGCGGCGA CCGCCCGCTG GCCCTGGGCA TCCTGCGCGC GCTGGGCGGT CCCAGCAATA TTCAAAACCT GGACGCCTGC ATCACCCGCC TACGCGTGAC AGTGCATGAC AAGGGTCAGG TCAACAAGGG CACCCTGCAA ACGCTGGGCG CGGCGGGCGT GCTGGAGGTT GGCAACAGCG TGCAGGCCGT CTTTGGCACC CGCAGCGACC AGCTCAAGGA GGAGATGCAG CGCGTGATTG CGGAGGGAGT CTACACAGCG TCTGACGAGC CTGACGAGGC CGCTGCGCTG ACCTCCCGCG CGGACGCGAG TCCCGCCCCG GTTCCGCCCC CGGTGGCCCC CGCGACCGTC CGCTCCGCCA GTCCTGCGCT CATCCCCGAC CCTGCATCCG CTGCCCCCGG CCTGCCCGCC GACTTCACCC TTCCCCTCGC GGGCCGCGTG CTGCCCCTTT CCGAGGTGCC CGATCCCGTC TTCAGCGGCA AGATCATGGG GGACGGGTTC GCCATCGACC CTGTGAGCGG CGAGGTGCGT TCGCCCGTGA GCGGCGAGGT CATCACCCTG TTTCCCACTG GGCACGCCGT CGGCCTGCGG GCGGACAACG GGTTGGAAGT GCTCGTTCAC ATCGGTATCG ACACGGTGGG TCTCAACGGT GAGGGCTTCA CGCCGCTGGT GCGGCAGGGA GAGCACGTGA CTGCTGGGCA GCCGCTGATC CGGGTGAATC TCGAGGCCAT TCGGGGCCGG GTCCCCAGCC TGATCACGCC GGTCGTCTTC ACCAACCTCG CGCCGGGACA GCGGGTGGAA TTGGACGGCC AGACCGTTCG CCTTGTGTAA
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Protein sequence | MSTPAPALPP RRSAFAALQE IGKALMLPVA VLPAAGLLLG FGSAFNDPSY TWHASIPHWL QFVGTLMVGA SNAIFGNLPI IFALGVAIGL AAGAGVAALA ALVGFLVMNA TMSAYLGLGD AAKFADLSRA QPGAYATVLG IPTLQTGVFG GILMGLLSAF LYNRYKDIRL PAFLGFFAGR RFVPIVTAAA AIVLGIVLTY LWPPVQHGLN VFSNVATQGA PVAASGIFGF INRLLIPFGL HHIWYQPFWF IAGDYTNPQT GQVVHGDLTR YIAGDRSAGI FMTGFFPIMM FALPAAALAM VQEARPERRR VIAGIMASAA LTSFLTGITE PIEFAFMFVA PLLYVFHAAM TGLSFVVMNL LGSHNGFTFS GGAIDYFLLM PKSTRPWLVP VVGLVFAAIY YVVFRAAIRR FNLLTPGREA VTTEDTATAT VLPRGGDRPL ALGILRALGG PSNIQNLDAC ITRLRVTVHD KGQVNKGTLQ TLGAAGVLEV GNSVQAVFGT RSDQLKEEMQ RVIAEGVYTA SDEPDEAAAL TSRADASPAP VPPPVAPATV RSASPALIPD PASAAPGLPA DFTLPLAGRV LPLSEVPDPV FSGKIMGDGF AIDPVSGEVR SPVSGEVITL FPTGHAVGLR ADNGLEVLVH IGIDTVGLNG EGFTPLVRQG EHVTAGQPLI RVNLEAIRGR VPSLITPVVF TNLAPGQRVE LDGQTVRLV
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