| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2581 |
|---|
| Symbol | |
|---|
| ID | 4073812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008010 |
|---|
| Strand | - |
|---|
| Start bp | 470665 |
|---|
| End bp | 473046 |
|---|
| Gene Length | 2382 bp |
|---|
| Protein Length | 793 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641228894 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_594089 |
|---|
| Protein GI | 94972049 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGTT CCCCTCCTAC TTCCAGCACC CACCTGCGCT ACTTCGTCAA CAACATGGAC
TGTGCCGACT GCGCCCGCAC CGTACAAAGC GCCCTGACCC GGCTGCCCGG CGTGGGCGAT
CCCAAAGTCA ACTTCACCAC CCAGACCCTC AGCCTCACCC TCGACGAGGC CCGGCTGTCC
CGTGAGCGCC TGGAACAGAC CCTGCGCTCC CTGGGCTACC CCCCCACGCT GCAATCCCCC
AACCCCACCT CCACCGCACC GCTGCGCTAC TTCGTCAACA ACATGGACTG TGCCGACTGC
GCCAACAAGG TTCAGGGCGT CGTCACGCGA CTGCCGGGCG TCAGTGAGCC CAAGGTCAAC
TTCACCACCC AGACCCTCAG CCTGACCCTC GATGAGGCCC GGACCCCCAG AGCTCAGCTT
GAACAGACCC TGCGCTCCAT CGGGTATCCG CCGGAATTGC AGGCCGAGGT CAATCCAGCA
CCCGGCACGG CCTCGATCAG CGCCCCCCGA CCTGCCCGCG TGGAACTGCC CTGGTACCGA
ACCAGCAAAG GCCGCAACGT CCTGCTCACG GGTGGGCTGC TTGCCCTGGC CTTCGTCTTC
AGTCTGGTCG CGCCGTCCCT GGCGTTCTGG GCCTACGCAG CTGCCACCGC CATTGGCGTG
TGGCCCCTGC TCCGCAAGGC CGTCGCCAGT GCCCGCCTGG GGGAGCCCTT CACCATCAAC
ACCCTGATCA GCGTGGCTGC CATCGGCGCC ATCGCCATCG GTGAGGCCGC AGAAGGCGCC
CTCGTCGTCT TCCTGTTCGC CATTGGCGAA CTGCTGGAGA ACGTCGCGGC CGGGCGGGCG
CGGGCAGGGA TTCAGGCGCT CGCGGCCCTG GCACCCAAGA CTGCCCTGCT GCTTGAAGGC
AACCAGACCC GCGAGGTGCC CGTCGAGCAG TTGCAGGTCG GGCAGCTGGT CCGGGTGCAG
CCCGGTGGCC GCGTTCCAGC CGACGGAACC ATTACCGAAG GCGACTCCAA CCTCGACGAC
TCCCCGGTGA CGGGCGAGAG CGTCCCCGTC CACAAGAGCG CCGGCGACAC CGTGTACGCG
GGCAGCATCA ACACCGACGG GGTGCTGACC GTCCAGGTGG ACCGGGGCGC CTCGGACAAC
ACCATCGCCC GGATCATCCA CCTGGTCGAG GAGGCCGAGT CGTCCAAGGC GCCCACCGCG
CGCTTCATCG ACCGCTTCTC CCGCTGGTAC ACCCCGGCGG CGATGGCCGT GGCCTTCCTG
TTCGCTGTCC TCCCACCGCT GCTGTTCGGC CAGCCCTGGA ACGAATGGAT CTACAAAGGT
GTGGCCCTGC TGCTGATCGC CTGCCCCTGT GCCCTGGTGC TGAGCGTCCC TGCTGCCATG
ACCAGCGGCA TCTCGGCGGG TGCCCGGCGC GGCCTGCTGA TCAAGGGCGG TGCCGCGCTG
GAGACCATCG GCAGTGTCTC GACGGTCGCC TTCGACAAGA CCGGCACGCT GACCGAGAAC
AAGCCCCAGG TGACGGACGT GATCGGCCTG CGCGCTCCAG AACAAGAGGT CGTCCTGCTC
GCCGCCGCCG TGGAGACGGG GAGCGCCCAC CCGCTCGCCA AGGCGATCCT CGCCCGTGCC
CAGGGGCAGG CCGTCCCCGC TGCTCAGGAC GCCAAGGCCA TCTCGGGCAA GGCCGTGACT
GCCACGGTGC AGGGCCGTGC CCTCGCGGTG GGGTCCCCGC GCTACGCCGT GGAAGTGGCC
TCGCTGAGTC CTGACGAGCA GGCGCAGATC GCCCGGCTGG AGGAGCAGGG CAAAACGGTG
GTGGTGGTGC TCGACGGCCG CCAGGTGCTC GGTTTGCTCG CCATTCGGGA CGAGCCGCGA
GCGGACGCGA AAGAGGCGGT GGCCCGGCTC AAAGGTCTTG GTGTGCGCTC GCTGATGCTC
ACGGGCGACA ACGCCCGCAC CGGCAACGCC ATCGCACGTG ACCTGGGCCT GGACGTGGAG
GCCGAGCTGC TGCCGGAAGA CAAACTCCAG CGGATCGCCG CCCTGAAGCA AAGCGGCAAG
GTGGCGATGG TGGGCGACGG CATCAACGAC GCCCCAGCGC TCGCGCAAAG TGACGTGGGC
ATCGCGATGG GCGGGGGCAC TGACGTGGCC CTGGAAACCG CCGACGCCGC CCTGCTGCGG
CACTCGGTCA CGGGCGTCGC GGAACTCGTG GAACTCTCCC GGGCCGTCAT GACCAACATC
CGTCAGAACG TGGCCTTCGC GCTGGGCCTC AAGGCGATCT TCCTCGTGAC CACGCTGCTC
GGCATCACCG GCCTGTGGCC CGCGATCCTC AGTGACACGG GCGCCACCGT CCTGGTGACC
GCCAACGCCC TGCGCCTGCT GCGCTTCAAG CCCGGCGTGT GA
|
|---|
| Protein sequence | MTSSPPTSST HLRYFVNNMD CADCARTVQS ALTRLPGVGD PKVNFTTQTL SLTLDEARLS
RERLEQTLRS LGYPPTLQSP NPTSTAPLRY FVNNMDCADC ANKVQGVVTR LPGVSEPKVN
FTTQTLSLTL DEARTPRAQL EQTLRSIGYP PELQAEVNPA PGTASISAPR PARVELPWYR
TSKGRNVLLT GGLLALAFVF SLVAPSLAFW AYAAATAIGV WPLLRKAVAS ARLGEPFTIN
TLISVAAIGA IAIGEAAEGA LVVFLFAIGE LLENVAAGRA RAGIQALAAL APKTALLLEG
NQTREVPVEQ LQVGQLVRVQ PGGRVPADGT ITEGDSNLDD SPVTGESVPV HKSAGDTVYA
GSINTDGVLT VQVDRGASDN TIARIIHLVE EAESSKAPTA RFIDRFSRWY TPAAMAVAFL
FAVLPPLLFG QPWNEWIYKG VALLLIACPC ALVLSVPAAM TSGISAGARR GLLIKGGAAL
ETIGSVSTVA FDKTGTLTEN KPQVTDVIGL RAPEQEVVLL AAAVETGSAH PLAKAILARA
QGQAVPAAQD AKAISGKAVT ATVQGRALAV GSPRYAVEVA SLSPDEQAQI ARLEEQGKTV
VVVLDGRQVL GLLAIRDEPR ADAKEAVARL KGLGVRSLML TGDNARTGNA IARDLGLDVE
AELLPEDKLQ RIAALKQSGK VAMVGDGIND APALAQSDVG IAMGGGTDVA LETADAALLR
HSVTGVAELV ELSRAVMTNI RQNVAFALGL KAIFLVTTLL GITGLWPAIL SDTGATVLVT
ANALRLLRFK PGV
|
|---|
| |