| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2419 |
|---|
| Symbol | |
|---|
| ID | 4073647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008010 |
|---|
| Strand | - |
|---|
| Start bp | 67111 |
|---|
| End bp | 68088 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641228534 |
|---|
| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD |
|---|
| Protein accession | YP_593927 |
|---|
| Protein GI | 94971887 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2514] Predicted ring-cleavage extradiol dioxygenase |
|---|
| TIGRFAM ID | [TIGR02295] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCC CCGCCCATCC CGATATCGTT CGCGTCGCCC ACGCCGTCTT CACCGTCACG
GACCTGGAAG CTTCGCGCGA GTTCTATGTG AACCTGCTCG GTCTGAACGT GCTGCACGAG
GAGCCGGGCG CCCTCTACCT GCGCGGGGTG GAGGACCGCG AGTGGACCCT CAAGCTGGAA
GAGAACCCGG AAGCCGGGGT GCGGCACATC GCCTACCGGG TGCGGACGTA CGCCGACCTG
GACGGCCTGG TCGCGCTGGC GGAGCGTGAG GGCCTCCCCT CCCGCTGGGA AGAGGAACTC
GACCGGCCCC GCATGCTGCG CATGCAAGAC CCCTTTGGCG TCCCGGTCGC CTTTTACCGC
GAGAGCCGCA CCCACCCCTG GTTCTTGCAG GACTACCACC TGCACCGCGG GCCGGGTTTG
CAACGGGTGG ACCACGTGAA CGTGATGACG CCGGACGTGG AAGGCATGCT GGGCTGGTAC
ACGCGCGAAC TGGGGTTCCG CGTCTCCGAG TACACCGAGG ACGAGGCGGG GCGCATCTGG
GCGGCCTGGA TTCAGCGGCG GGGCGGCGTG CATGACCTCG CCCTGACGAA TGGCGCGGGG
CCGCGGCTGC ACCACTGGGC CTACTGGATG CCCGACGCCA TGAGCATCAT CCGCGCCTGC
GACATCCTGG CGGGGGCGCG GCAGCCCGAG CGCATCGAGC GCGGGCCGGG GCGGCACGGC
ATCTCCAACG CCTTTTTCCT GTATATCCGC GACCCAGACG GCCACCGCAT CGAGCTGTAC
ACCTCTGACT ACCTCACGGT GGACCCCGAC TTCCAGCCCA TCCGCTGGCA GCTCAACGAC
CCGCGGCGCC AGACGCTGTG GGGGGCCAAG ACGCCGCGGA GCTGGTTTGA GGAAGGCTCG
CGGCTGGAAG CTTTCGGCGG GGGCTGGGTC ACGCCGGCGG AGGGGCAGCT GAAGGGGCTA
CCGGTTCATG TCATCTGA
|
|---|
| Protein sequence | MTAPAHPDIV RVAHAVFTVT DLEASREFYV NLLGLNVLHE EPGALYLRGV EDREWTLKLE
ENPEAGVRHI AYRVRTYADL DGLVALAERE GLPSRWEEEL DRPRMLRMQD PFGVPVAFYR
ESRTHPWFLQ DYHLHRGPGL QRVDHVNVMT PDVEGMLGWY TRELGFRVSE YTEDEAGRIW
AAWIQRRGGV HDLALTNGAG PRLHHWAYWM PDAMSIIRAC DILAGARQPE RIERGPGRHG
ISNAFFLYIR DPDGHRIELY TSDYLTVDPD FQPIRWQLND PRRQTLWGAK TPRSWFEEGS
RLEAFGGGWV TPAEGQLKGL PVHVI
|
|---|
| |