| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2335 |
|---|
| Symbol | gidB |
|---|
| ID | 4057188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 2455417 |
|---|
| End bp | 2456154 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641231384 |
|---|
| Product | 16S rRNA methyltransferase GidB |
|---|
| Protein accession | YP_605796 |
|---|
| Protein GI | 94986432 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
|---|
| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGG AGGGACGCGC CCTGCTTCTG GCGGGAGCCG CCGAGCTGGG CCTTGAGCTG
AGTGCAGAGC ACCTCGACCG CTTCGCGCGG CTGCTGGTGC GGCTGACCGA AGGCTCAGCC
CAGCTCAACC TGACGGCCCT GCATCAAGAG CGCGACATCG TGCTCAAGCA TTTCGTAGAC
TCGCTGACCT GTCTGCGTGG GGGGTGGCTG GACGGGGCGG CGCGGGTGCT GGATCTCGGC
ACCGGGGCAG GATTTCCAGC GCTTCCGCTG GCGATCGTGC GGCCCGACCT TCAACTTGTG
GCGCTGGATG CCACCCGCAA AAAGGTAGAT TTTGTGGAGC GGACGGCGCG GAGCCTCGAA
CTGAACCATG TCCAGCCCCT GACCGGGCGG GCCGAAACCC TGGGACGCGA TCCGGCACAG
CGGGAAAGCT ATGACCGGGT GGTGACCCGT GCGGTGGCGG CCCTTCCCAT CCTGGCGGAA
CTCACGCTGC CGTTCCTGCG AATGGGAGGC TTTCTCCTGG CCCAGAAGGG ACCGATTGGC
CCCGAAGAAC TGGAGGCGGG TACGCGCGCG GCCCAGGAGG TCGGCGGGGA GATTCGGGCC
ATTGATGCCT TTGTTTTGCC GGTTGCAGGA GATGCCCGTA CCCTGGTGGT GGTTGAGAAA
ACCGCGCCCA CCCCCGAGCG TTACCCGCGC CGCGAGGGCG TGCCGAACCG CAAGCCGTTA
TTCTGGCGGG CGACGTGA
|
|---|
| Protein sequence | MTPEGRALLL AGAAELGLEL SAEHLDRFAR LLVRLTEGSA QLNLTALHQE RDIVLKHFVD
SLTCLRGGWL DGAARVLDLG TGAGFPALPL AIVRPDLQLV ALDATRKKVD FVERTARSLE
LNHVQPLTGR AETLGRDPAQ RESYDRVVTR AVAALPILAE LTLPFLRMGG FLLAQKGPIG
PEELEAGTRA AQEVGGEIRA IDAFVLPVAG DARTLVVVEK TAPTPERYPR REGVPNRKPL
FWRAT
|
|---|
| |