Gene Dgeo_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2144 
Symbol 
ID4058879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2256797 
End bp2257366 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content66% 
IMG OID641231184 
ProductHNH endonuclease 
Protein accessionYP_605607 
Protein GI94986243 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTTG TGAATCCCCG AGCGAGCGTG ACGAGAGAGG AGGCGCGCGG AATGCGCGTG 
GCGCCGGACC TCAACGCACC GCGCGTGCTG GTCCTGAACG CGTCGTACGA ACCCTTGCAC
GTGACCAGCG CCAAACGCGC GATCACTCTG CTTCAGTATG GCGTGGCCGA GGTGCTGGAG
GTCAGTGAAG ACGTGGTCCG CTCGCCCAGT ACCGTCCTGC TCGTCCCGAG CGTGATTCGG
CTGAAGCGCT ATGTCCGGCG CCCGCGCGTG CATCCGGTGC CCTTCAACCG CCGCAACGTG
CTGAGGCGCG ATACCTTTGC CTGCCAGTAC TGCGGCGCGG AAACGGATCT CACCCTCGAC
CACGTGCTGC CACGTTCGCG TGGAGGGCGA CACAGCTGGG AAAATGTGGT GACGGCCTGC
CGAACCTGCA ACCAGCGCAA GGGGAACCGC ACCCCTGACG AGGCCGGGAT GCCACTGCGC
TCCCGGCCTC GCGCGCCTAC ATTTGGGGTA TATGCCCACG GCCAGTTTGC CCACTGGCAA
CCGGAATGGG CGCGGTACAT CGGAGGCTAG
 
Protein sequence
MPLVNPRASV TREEARGMRV APDLNAPRVL VLNASYEPLH VTSAKRAITL LQYGVAEVLE 
VSEDVVRSPS TVLLVPSVIR LKRYVRRPRV HPVPFNRRNV LRRDTFACQY CGAETDLTLD
HVLPRSRGGR HSWENVVTAC RTCNQRKGNR TPDEAGMPLR SRPRAPTFGV YAHGQFAHWQ
PEWARYIGG